RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	TMEM106C	Q9BVX2	250 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	ZNF407	Q9C0G0	2248 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	AQP7P3	A6NL99	342 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179		B4E171	279 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	ZNF17	P17021	662 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	TSPAN7	P41732	249 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	TDRG1	Q3Y452	100 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	PTRH2	Q9Y3E5	179 aa	Known RBP	13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	ARL2-SNX15	V9GYD0	113 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	TICRR	Q7Z2Z1	1910 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	CCL5	P13501	91 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	IL3RA	P26951	378 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	LHFPL2	Q6ZUX7	228 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	ZDHHC23	Q8IYP9	409 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	CPEB3	Q8NE35	698 aa	Known RBP	13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	TSTD1	Q8NFU3	115 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	OR4D5	Q8NGN0	318 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	ZNF721	Q8TF20	911 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	SPSB1	Q96BD6	273 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	TMEM106B	Q9NUM4	274 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179		A0A1B0GW64	132 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	ZNF814	B7Z6K7	855 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	FNDC7	Q5VTL7	733 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	MRGPRX1	Q96LB2	322 aa		13.49	□□□□□ -0.25
SYNRG-223	ENST00000616179	CEACAM18	A8MTB9	384 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	SRSF10	O75494	262 aa	Known RBP	13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	GPM6A	P51674	278 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	TMPRSS7	Q7RTY8	843 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	WDFY1	Q8IWB7	410 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	ZNF738	Q8NE65	137 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	OR10G3	Q8NGC4	313 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	C1orf147	Q96MC9	270 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	UHRF2	Q96PU4	802 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	TPR	P12270	2363 aa	Known RBP	13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	SERF1A	O75920	110 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	SAPCD1	Q5SSQ6	148 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	FAM89B	Q8N5H3	189 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	KLHDC1	Q8N7A1	406 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	OR10G8	Q8NGN5	311 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	NINJ1	Q92982	152 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	PRRG4	Q9BZD6	226 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	PLEKHA3	Q9HB20	300 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	WIPI2	Q9Y4P8	454 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	FRMPD3	Q5JV73	1810 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	CBR3	O75828	277 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	TMEM50A	O95807	157 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	LINC00614	P0C842	121 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	DNLZ	Q5SXM8	178 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	P2RX4	Q99571	388 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	MTCH1	Q9NZJ7	389 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	FBLN5	Q9UBX5	448 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	AHCTF1	Q8WYP5	2266 aa		13.48	□□□□□ -0.25
SYNRG-223	ENST00000616179	UNQ5815/PRO19632	Q6UWF5	114 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	ADIPOR1	Q96A54	375 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	EFEMP2	O95967	443 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	CCL2	P13500	99 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	NPBWR2	P48146	333 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	CDC34	P49427	236 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	OR1D5	P58170	312 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	OR8G5	Q8NG78	346 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	OR5L2	Q8NGL0	311 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	PLPPR2	Q96GM1	343 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	LNP1	A1A4G5	178 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	APOA2	P02652	100 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	C1QTNF9	P0C862	333 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	RND2	P52198	227 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	ATP6V1F	Q16864	119 aa		13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179	ALKBH7	Q9BT30	221 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-223	ENST00000616179		E9PLN8	166 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	C17orf112	F2Z3M2	114 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	GALR2	O43603	387 aa	Predicted RBP	13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	BRS3	P32247	399 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	YPEL5	P62699	121 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	SRY	Q05066	204 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	HLA-DRB5	Q30154	266 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179		Q56UQ5	140 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	MRPL54	Q6P161	138 aa	Known RBP	13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	IFI44	Q8TCB0	444 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	TAF15	Q92804	592 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	FGF21	Q9NSA1	209 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179		R4GN57	208 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	C5orf42	Q9H799	3197 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	ANOS1	P23352	680 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	MAS1L	P35410	378 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	PLA2G5	P39877	138 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	TRIM61	Q5EBN2	209 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	MRPL18	Q9H0U6	180 aa	Known RBP	13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	CLN8	Q9UBY8	286 aa		13.46	□□□□□ -0.25
SYNRG-223	ENST00000616179	SLC17A3	O00476	420 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	RRP8	O43159	456 aa	Known RBP	13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	TSPAN2	O60636	221 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	HSBP1	O75506	76 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	RAC2	P15153	192 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	ADM	P35318	185 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	CAPZB	P47756	277 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	UCP2	P55851	309 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	TCTEX1D1	Q8N7M0	179 aa		13.46	□□□□□ -0.26
SYNRG-223	ENST00000616179	ZNF385A	Q96PM9	386 aa	Known RBP	13.46	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms