RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 FAM46BQ96A09 425 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 MND1Q9BWT6 205 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 CST11Q9H112 138 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 OR2S2Q9NQN1 319 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 MBNL3Q9NUK0 354 aaKnown RBP12.53□□□□□ -0.4
CRLF3-203ENST00000578692 KCNIP1Q9NZI2 227 aa12.53□□□□□ -0.4
CRLF3-203ENST00000578692 ANKRD65E5RJM6 399 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 AP4M1O00189 453 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 PDCD6O75340 191 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 THBS3P49746 956 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 C6orf141Q5SZD1 244 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 MRPL41Q8IXM3 137 aaKnown RBP12.52□□□□□ -0.41
CRLF3-203ENST00000578692 CYYR1Q96J86 154 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 S1PR3Q99500 378 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 RASL11BQ9BPW5 248 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 DCLRE1BQ9H816 532 aa12.52□□□□□ -0.41
CRLF3-203ENST00000578692 NUDT19A8MXV4 375 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 MPIG6BO95866 241 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 UBBP0CG47 229 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 SLC6A1P30531 599 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 GPR12P47775 334 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 SPHARQ15513 63 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 PNLIPRP3Q17RR3 467 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 TEX38Q6PEX7 206 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 ETV3LQ6ZN32 361 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 C5orf24Q7Z6I8 188 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 ZNF554Q86TJ5 538 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 LRRTM1Q86UE6 522 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 OR8H1Q8NGG4 311 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 MRPL30Q8TCC3 161 aaKnown RBP12.51□□□□□ -0.41
CRLF3-203ENST00000578692 NEDD4LQ96PU5 975 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 GON7Q9BXV9 100 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 SCN3BQ9NY72 215 aa12.51□□□□□ -0.41
CRLF3-203ENST00000578692 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 SRMP19623 302 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 MYCNOSP40205 109 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 F2RL1P55085 397 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 MED22Q15528 200 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 NKAPLQ5M9Q1 402 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 RBM48Q5RL73 367 aaKnown RBP12.5□□□□□ -0.41
CRLF3-203ENST00000578692 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 OR10K2Q6IF99 312 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 OR52L2PQ8NGH6 319 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 PHYHIPQ92561 330 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 RBMXL1Q96E39 390 aaKnown RBP12.5□□□□□ -0.41
CRLF3-203ENST00000578692 LRRC42Q9Y546 428 aa12.5□□□□□ -0.41
CRLF3-203ENST00000578692 LANCL1O43813 399 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 CHATP28329 748 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 RPS27AP62979 156 aaKnown RBP12.49□□□□□ -0.41
CRLF3-203ENST00000578692 HTD2P86397 168 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 ZNF695Q8IW36 515 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 KCNG3Q8TAE7 436 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 GALMQ96C23 342 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 SULT4A1Q9BR01 284 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 FAAP24Q9BTP7 215 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 NKX1-2Q9UD57 310 aaPredicted RBP12.49□□□□□ -0.41
CRLF3-203ENST00000578692 JPT1Q9UK76 154 aa12.49□□□□□ -0.41
CRLF3-203ENST00000578692 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
CRLF3-203ENST00000578692 DNAH3Q8TD57 4116 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 K7EIL1 84 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 RRP9O43818 475 aaKnown RBP12.48□□□□□ -0.41
CRLF3-203ENST00000578692 YPEL1O60688 119 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 HTR2CP28335 458 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 SOX6P35712 828 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
CRLF3-203ENST00000578692 KRTAP10-11P60412 298 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 LSAMPQ13449 338 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 GNMTQ14749 295 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 HSD17B12Q53GQ0 312 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 P2RX4Q99571 388 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 ABHD14AQ9BUJ0 271 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 TMEM59Q9BXS4 323 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 GPR61Q9BZJ8 451 aa12.48□□□□□ -0.41
CRLF3-203ENST00000578692 RGS11O94810 467 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 RPLP1P05386 114 aaKnown RBP12.47□□□□□ -0.41
CRLF3-203ENST00000578692 CD37P11049 281 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
CRLF3-203ENST00000578692 EGFEM1PQ0D2K5 195 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
CRLF3-203ENST00000578692 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 C6orf201Q7Z4U5 140 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 HSPB9Q9BQS6 159 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 MCRIP2Q9BUT9 160 aaKnown RBP12.47□□□□□ -0.41
CRLF3-203ENST00000578692 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms