RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SCAF4O95104 1147 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 IGLV2-14P01704 120 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 HSPB1P04792 205 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 ARG1P05089 322 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 OR8U8P0C7N1 319 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 OR13C7P0DN81 318 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CCL2P13500 99 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 OMGP23515 440 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 WNT5AP41221 380 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 TAS2R30P59541 319 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 VAMP2P63027 116 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 HLA-DRB3P79483 266 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 ICAM4Q14773 271 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 TGIF1Q15583 401 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 AKIRIN2Q53H80 203 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 Q6P435 159 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 TUSC5Q8IXB3 177 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CMTM1Q8IZ96 169 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CISD2Q8N5K1 135 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 FAM24BQ8N5W8 94 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 ZFP62Q8NB50 900 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CLDND2Q8NHS1 167 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CD300LFQ8TDQ1 290 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 LSM10Q969L4 123 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 GPR146Q96CH1 333 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 RBMXL1Q96E39 390 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 THOC3Q96J01 351 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 GPHA2Q96T91 129 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 C20orf24Q9BUV8 137 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 OR51I2Q9H344 312 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 B4GALT7Q9UBV7 327 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 OR2W1Q9Y3N9 320 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CEP250Q9BV73 2442 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 ARID1AO14497 2285 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 LRP5LA4QPB2 252 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 CXorf65A6NEN9 183 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 CDRT15L2A8MXV6 281 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 C9orf172C9J069 976 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 F8W735 103 aaPredicted RBP4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 H3BQ15 152 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 AP4M1O00189 453 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 DEGS1O15121 323 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 PPIHO43447 177 aaKnown RBP4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 DFFBO76075 338 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 CST7O76096 145 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 OR2C1O95371 312 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 SYNGR4O95473 234 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 IGKV1-39P01597 117 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 HBE1P02100 147 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 IGKV1D-39P04432 117 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 S100A6P06703 90 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF883P0CG24 379 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF14P17017 642 aaPredicted RBP4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 GNG3P63215 75 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 TLE4Q04727 773 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 FABP9Q0Z7S8 132 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF154Q13106 437 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 HAGHQ16775 308 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 KHDC3LQ587J8 217 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 KRBOX4Q5JUW0 171 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 C9orf135Q5VTT2 229 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 RBMS3Q6XE24 437 aaKnown RBP4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 Q6ZRM9 215 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF573Q86YE8 665 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 FAM58AQ8N1B3 248 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 MBD3L1Q8WWY6 194 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 APH1AQ96BI3 265 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 RAB39BQ96DA2 213 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 HIST1H2AAQ96QV6 131 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 RAB40CQ96S21 281 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF251Q9BRH9 671 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 TCEAL7Q9BRU2 100 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 PARD6GQ9BYG4 376 aaPredicted RBP4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 TTTY12Q9BZ98 90 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 CALHM2Q9HA72 323 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 TREM2Q9NZC2 230 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 WSB1Q9Y6I7 421 aa4.4□□□□□ -1.7
ATPAF1-212ENST00000542495 DOCK10Q96BY6 2186 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 LOC102723971A0A1B0GUV8 181 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 A0A1B0GV50 99 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ANKRD30BLA7E2S9 258 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 J3QT63 122 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 HSPB6O14558 160 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNHIT1O43257 154 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 IL18BPO95998 194 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 F10P00742 488 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 IFNA17P01571 189 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 CCNOP22674 350 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 S100GP29377 79 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 MDH2P40926 338 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 MAGEA5P43359 124 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ERVK11-1P61568 191 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 RPL23AP62750 156 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 RUNX1Q01196 453 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 PLP2Q04941 152 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 SRYQ05066 204 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 PMS2P11Q13670 270 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 OR1C1Q15619 314 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms