RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PPP1R1AQ13522 171 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 EBPQ15125 230 aaKnown RBP2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 MMDQ15546 238 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 CYHR1Q6ZMK1 362 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 MARCH3Q86UD3 253 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 SLC51BQ86UW2 128 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF695Q8IW36 515 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 HS3ST5Q8IZT8 346 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 OR8S1Q8NH09 359 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 OR51H1Q8NH63 302 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 TMBIM1Q969X1 311 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 REEP6Q96HR9 211 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 CCDC94Q9BW85 323 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 EIF5A2Q9GZV4 153 aaKnown RBP2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 FAM60AQ9NP50 221 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 EMC3Q9P0I2 261 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 POLR1DQ9Y2S0 133 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 CROCCQ5TZA2 2017 aa2.41□□□□□ -2.02
TRAPPC13-208ENST00000505553 TRAPPC8Q9Y2L5 1435 aa2.4□□□□□ -2.02
TRAPPC13-208ENST00000505553 CPS1P31327 1500 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 DISP1Q96F81 1524 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 ARHGEF12Q9NZN5 1544 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 BIVM-ERCC5R4GMW8 1640 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 GOLGA6L4A6NEF3 574 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 ARGFXA6NJG6 315 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 F5H5P2 479 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 KCNK2O95069 426 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 RPS17P08708 135 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 FBP1P09467 338 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 IDH2P48735 452 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 AP3S2P59780 193 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 KRTAP10-1P60331 282 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 CXCR4P61073 352 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 SLC35A2P78381 396 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 BASP1P80723 227 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 FMODQ06828 376 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 ABCA11PQ4W5N1 156 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 CLVS2Q5SYC1 327 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 SPATA31B1PQ5VZV4 182 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 SPOPLQ6IQ16 392 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 RASSF6Q6ZTQ3 369 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 AMN1Q8IY45 258 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR9I1Q8NGQ6 314 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 SPPL2BQ8TCT7 592 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 C16orf78Q8WTQ4 265 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR7D2Q96RA2 312 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRIB3Q96RU7 358 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 SPIN2AQ99865 258 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 SPIN2BQ9BPZ2 258 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZNF717Q9BY31 904 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 BCL2L14Q9BZR8 327 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 LINC00527Q9UJ94 153 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 MAGI2Q86UL8 1455 aa2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 TDRD6O60522 2096 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-208ENST00000505553 DNMT1P26358 1616 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ABCA9Q8IUA7 1624 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 CFAP74Q9C0B2 1584 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGHV3-21A0A0B4J1V1 117 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGHV3-43A0A0B4J1X8 118 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 TMEM114B3SHH9 223 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 B4DEV8 164 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGLL5B9A064 214 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 H3BSA7 217 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 MFNGO00587 321 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ISLRO14498 428 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 HLA-DRAP01903 254 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 IL6P05231 212 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 S100A2P29034 98 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 DDTP30046 118 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 OMPP47874 163 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 GABARAPL2P60520 117 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ACTBP60709 375 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ACTG1P63261 375 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 REEP5Q00765 189 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZNF616Q08AN1 781 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ENDOGQ14249 297 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 PDK2Q15119 407 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRMT12Q53H54 448 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 AKIRIN2Q53H80 203 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 TMEM31Q5JXX7 168 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 N4BP2L1Q5TBK1 243 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZNF880Q6PDB4 577 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 TCF23Q7RTU1 214 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 COMMD7Q86VX2 200 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 FER1L6-AS1Q8NA97 138 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 TMA16Q96EY4 203 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 PYURFQ96I23 114 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 SDHCQ99643 169 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 SHANK2-AS3Q9BTD1 123 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 LINC00574Q9H8X3 128 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 OPN4Q9UHM6 478 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 SLC22A13Q9Y226 551 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZMYM4Q5VZL5 1548 aa2.39□□□□□ -2.03
TRAPPC13-208ENST00000505553 EVC2Q86UK5 1308 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 GOLGA3Q08378 1498 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms