RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PPP1CCP36873 323 aaKnown RBP11.96□□□□□ -0.49
LRIF1-202ENST00000485275 DLX1P56177 255 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 FXYD4P59646 89 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 TRAT1Q6PIZ9 186 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 OR10V1Q8NGI7 309 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 OR10J5Q8NHC4 309 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 DACT3Q96B18 629 aaPredicted RBP11.96□□□□□ -0.49
LRIF1-202ENST00000485275 C5orf66Q9H5L9 145 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.49
LRIF1-202ENST00000485275 RDH8Q9NYR8 311 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 COPZ2Q9P299 210 aa11.96□□□□□ -0.49
LRIF1-202ENST00000485275 UBE2J1Q9Y385 318 aaPredicted RBP11.96□□□□□ -0.49
LRIF1-202ENST00000485275 hCG_2014768A0A024R1R8 64 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 A0A096LNT2 108 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 FAM172BPA6NC97 362 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF729A6NN14 1252 aaPredicted RBP11.95□□□□□ -0.5
LRIF1-202ENST00000485275 DIRAS3O95661 229 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 IGHV3-7P01780 117 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 VSIG10L2P0DP72 767 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 GNB2P62879 340 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 CLEC12BQ2HXU8 276 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 TMEM17Q86X19 198 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 LY6G5BQ8NDX9 201 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 LEAP2Q969E1 77 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF714Q96N38 554 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 OR2S2Q9NQN1 319 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 OPN4Q9UHM6 478 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 TRBV23-1A0A0A0MS06 115 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 FAM157AC9JC47 383 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 SPINT2O43291 252 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 CTXN2P0C2S0 81 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 DNASE1P24855 282 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 CEACAM6P40199 344 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 HTD2P86397 168 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
LRIF1-202ENST00000485275 CAPSLQ8WWF8 208 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 TOMM40LQ969M1 308 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 SLC25A21Q9BQT8 299 aaPredicted RBP11.95□□□□□ -0.5
LRIF1-202ENST00000485275 RTBDNQ9BSG5 229 aaPredicted RBP11.95□□□□□ -0.5
LRIF1-202ENST00000485275 TOLLIPQ9H0E2 274 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 TAS2R3Q9NYW6 316 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF69Q9UC07 566 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 GPR132Q9UNW8 380 aa11.95□□□□□ -0.5
LRIF1-202ENST00000485275 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF728P0DKX0 622 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 ZBTB25P24278 435 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 FPR2P25090 351 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 MECP2P51608 486 aaKnown RBP11.94□□□□□ -0.5
LRIF1-202ENST00000485275 PAX2Q02962 417 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 PRB3Q04118 309 aaPredicted RBP11.94□□□□□ -0.5
LRIF1-202ENST00000485275 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 OR2W1Q9Y3N9 320 aa11.94□□□□□ -0.5
LRIF1-202ENST00000485275 A8MXK9 166 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 GPR37O15354 613 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 SLC31A2O15432 143 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 HSPA12AO43301 675 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF134P52741 427 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 TATDN3Q17R31 274 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 TMED4Q7Z7H5 227 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 LRRC75A-AS1Q8N1F1 130 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 ZDHHC22Q8N966 263 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 GFOD1Q9NXC2 390 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 IDI2-AS1Q9NZ38 188 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 LPAR3Q9UBY5 353 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 JPT1Q9UK76 154 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 CELSR1Q9NYQ6 3014 aa11.93□□□□□ -0.5
LRIF1-202ENST00000485275 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 PEX14O75381 377 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 RLN1P04808 185 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 GNRHRP30968 328 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 LCN2P80188 198 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 MORN2Q502X0 79 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 Q5PR19 223 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 HEPN1Q6WQI6 88 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 ZNF439Q8NDP4 499 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 GAL3ST2Q9H3Q3 398 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 MMP26Q9NRE1 261 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 CR1P17927 2039 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 A0A1W2PPE3 182 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 C17orf98A8MV24 154 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 NFYBP25208 207 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 HERV-K104P61576 105 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 Q8N7P7 452 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 NINJ1Q92982 152 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 SEC22CQ9BRL7 303 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 AGMATQ9BSE5 352 aa11.92□□□□□ -0.5
LRIF1-202ENST00000485275 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms