RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 A8MV72 311 aaPredicted RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 ARNTLO00327 626 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 MMP16P51512 607 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SOWAHAQ2M3V2 549 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 DEFB119Q8N690 84 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 OR11H7Q8NGC8 314 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 FBXO17Q96EF6 278 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 HBEGFQ99075 208 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CCL19Q99731 98 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 LTBP3Q9NS15 1303 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 MEX3AA1L020 520 aaKnown RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 NKX2-2O95096 273 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 PDGFAP04085 211 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 HOXB1P14653 301 aaPredicted RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 CFHR2P36980 270 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CEACAM6P40199 344 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 LILRA2Q8N149 483 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 POM121Q96HA1 1249 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CISD1Q9NZ45 108 aaKnown RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 DYSFO75923 2080 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 A0A1W2PP11 408 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CXorf65A6NEN9 183 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 LEPROTO15243 131 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SRSF10O75494 262 aaKnown RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 P2RY1P47900 373 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 DLX4Q92988 240 aaPredicted RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 WBP1LQ9NX94 342 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 RNF186Q9NXI6 227 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 ARHGEF28Q8N1W1 1705 aaKnown RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 FRG2CA6NGY1 282 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 TRDCB7Z8K6 153 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 TGFB1I1O43294 461 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 C1orf105O95561 183 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CX3CL1P78423 397 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 MESTQ5EB52 335 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 NOXO1Q8NFA2 376 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 KIR2DL5BQ8NHK3 375 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 TMEM126AQ9H061 195 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SRD5A3Q9H8P0 318 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 TAS2R4Q9NYW5 299 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 HSPB7Q9UBY9 170 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 DPRXA6NFQ7 191 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 NRG2O14511 850 aaPredicted RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 SFTA3P0C7M3 94 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CEACAM1P13688 526 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 GPNMBQ14956 572 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SMN1Q16637 294 aaKnown RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 SNAI3Q3KNW1 292 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 MMD2Q8IY49 270 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 GCSAMQ8N6F7 178 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 GMLQ99445 158 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SPXQ9BT56 116 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 NTNG1Q9Y2I2 539 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 A0A0A6YYD4 124 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 J3QW42 95 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 NGFP01138 241 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 MPLP40238 635 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 NOVP48745 357 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
USF3-202ENST00000478658 FAM53BQ14153 422 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 DEFB109BQ30KR1 87 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SLC25A35Q3KQZ1 300 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 FGF13Q92913 245 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 ZNF479Q96JC4 524 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CAMPP49913 170 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 ALKAL2Q6UX46 152 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 SCGB3A1Q96QR1 104 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 LINC00470Q9BZP3 86 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TMEM74BQ9NUR3 256 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TOPAZ1Q8N9V7 1692 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 SCN11AQ9UI33 1791 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 CXorf51AA0A1B0GTR3 108 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 A1L4Q6 167 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 MAP1BP46821 2468 aaKnown RBP4.78□□□□□ -1.64
USF3-202ENST00000478658 DEFB133Q30KQ1 61 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 CLEC18BQ6UXF7 455 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 DRAM1Q8N682 238 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 KLK10O43240 276 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 ARL14EPLP0DKL9 152 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 HIST1H1DP16402 221 aaKnown RBP4.78□□□□□ -1.64
USF3-202ENST00000478658 DUSP2Q05923 314 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 UNC119Q13432 240 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 ACKR1Q16570 336 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 MESP1Q9BRJ9 268 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 GPR52Q9Y2T5 361 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 C22orf46C9J442 243 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 IER3P46695 156 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 ISXQ2M1V0 245 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TCTEX1D4Q5JR98 221 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TXNRD3NBQ6F5E7 133 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 RNF122Q9H9V4 155 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TREX1Q9NSU2 369 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 ATG2BQ96BY7 2078 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 NDUFB1O75438 58 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 LEPROTL1O95214 131 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 MPZL1O95297 269 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms