RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 RNF122Q9H9V4 155 aa15.36■□□□□ 0.05
HPS3-202ENST00000460120 GTF3C1Q12789 2109 aa15.36■□□□□ 0.05
HPS3-202ENST00000460120 IGKV1-39P01597 117 aa15.36■□□□□ 0.05
HPS3-202ENST00000460120 IGKV1D-39P04432 117 aa15.36■□□□□ 0.05
HPS3-202ENST00000460120 METTL15P1P0C7V9 234 aa15.36■□□□□ 0.05
HPS3-202ENST00000460120 TESK1Q15569 626 aa15.36■□□□□ 0.05
HPS3-202ENST00000460120 CACNA1HO95180 2353 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 ZNF14P17017 642 aaPredicted RBP15.35■□□□□ 0.05
HPS3-202ENST00000460120 RPS16P62249 146 aaKnown RBP15.35■□□□□ 0.05
HPS3-202ENST00000460120 PSG7Q13046 419 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 OR8G1Q15617 311 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 TRIP6Q15654 476 aaKnown RBP15.35■□□□□ 0.05
HPS3-202ENST00000460120 FAM24BQ8N5W8 94 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 RSG1Q9BU20 258 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 PBDC1Q9BVG4 233 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 OPA3Q9H6K4 179 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 SPAARA0A1B0GVQ0 90 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 FDCSPQ8NFU4 85 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 PLPPR2Q96GM1 343 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 SLC35B3Q9H1N7 401 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 RIMS4Q9H426 269 aaPredicted RBP15.35■□□□□ 0.05
HPS3-202ENST00000460120 GP6Q9HCN6 339 aa15.35■□□□□ 0.05
HPS3-202ENST00000460120 IGLV2-14P01704 120 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 SNRPEP62304 92 aaKnown RBP15.34■□□□□ 0.05
HPS3-202ENST00000460120 TLE1Q04724 770 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 AKR1C8PQ5T2L2 129 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 VWA1Q6PCB0 445 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 TMEM178AQ8NBL3 297 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 HIST1H2BAQ96A08 127 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 TNRC6AQ8NDV7 1962 aaKnown RBP15.34■□□□□ 0.05
HPS3-202ENST00000460120 PSPNO60542 156 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 RAB5CP51148 216 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 FABP6P51161 128 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 PRAMEF6Q5VXH4 476 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 PKIBQ9C010 78 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 MSL2Q9HCI7 577 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 RNF115Q9Y4L5 304 aa15.34■□□□□ 0.05
HPS3-202ENST00000460120 TNFSF10P50591 281 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 OR2B8PP59922 312 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 MRPL49Q13405 166 aaKnown RBP15.33■□□□□ 0.05
HPS3-202ENST00000460120 SRSF7Q16629 238 aaKnown RBP eCLIP15.33■□□□□ 0.05
HPS3-202ENST00000460120 LTC4SQ16873 150 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 SOHLH1Q5JUK2 328 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 FAM209BQ5JX69 171 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 STX12Q86Y82 276 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 ZNF295-AS1Q8N0V1 137 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 OR1L1Q8NH94 360 aa15.33■□□□□ 0.05
HPS3-202ENST00000460120 LRP5LA4QPB2 252 aa15.33■□□□□ 0.04
HPS3-202ENST00000460120 IGKV1-5P01602 117 aa15.33■□□□□ 0.04
HPS3-202ENST00000460120 AESQ08117 197 aa15.33■□□□□ 0.04
HPS3-202ENST00000460120 HABP2Q14520 560 aaPredicted RBP15.33■□□□□ 0.04
HPS3-202ENST00000460120 DEFB124Q8NES8 71 aa15.33■□□□□ 0.04
HPS3-202ENST00000460120 CNOT1A5YKK6 2376 aaKnown RBP15.33■□□□□ 0.04
HPS3-202ENST00000460120 RBFOX3A6NFN3 312 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 OR3A1P47881 315 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 UCP2P55851 309 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 LINC00205P59089 165 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 SPSB3Q6PJ21 355 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 BTNL3Q6UXE8 466 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 LINC00596Q86U02 117 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 BIN3Q9NQY0 253 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 IGHV3-43A0A0B4J1X8 118 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 ZNF727A8MUV8 499 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 HEXAP06865 529 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 IGHV3-43DP0DP04 118 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 HOXB1P14653 301 aaPredicted RBP15.32■□□□□ 0.04
HPS3-202ENST00000460120 SULT1A1P50225 295 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 TGFBR3Q03167 851 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 ZNF816Q0VGE8 651 aaPredicted RBP15.32■□□□□ 0.04
HPS3-202ENST00000460120 SPANXN5Q5MJ07 72 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 ADAM5Q6NVV9 412 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 ZNF497Q6ZNH5 498 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 OR52L2PQ8NGH6 319 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 KLF14Q8TD94 323 aaPredicted RBP15.32■□□□□ 0.04
HPS3-202ENST00000460120 GMPPAQ96IJ6 420 aaPredicted RBP15.32■□□□□ 0.04
HPS3-202ENST00000460120 ATP5SQ99766 215 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 VSIRQ9H7M9 311 aa15.32■□□□□ 0.04
HPS3-202ENST00000460120 RYDENQ9NUL5 291 aaKnown RBP15.32■□□□□ 0.04
HPS3-202ENST00000460120 PRSS44E7EML9 344 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 WT1P19544 449 aaPredicted RBP15.31■□□□□ 0.04
HPS3-202ENST00000460120 FGF8P55075 233 aaPredicted RBP15.31■□□□□ 0.04
HPS3-202ENST00000460120 RPL23AP62750 156 aaKnown RBP15.31■□□□□ 0.04
HPS3-202ENST00000460120 ARL16Q0P5N6 197 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 FOXF2Q12947 444 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 RFESDQ8TAC1 157 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 POM121Q96HA1 1249 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 ZDHHC11Q9H8X9 412 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 POLDIP2Q9Y2S7 368 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 A0A1W2PPE3 182 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 DEFB108AA8MXU0 73 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 SH2D1BO14796 132 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 RAMP3O60896 148 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 HAND1O96004 215 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 ZNF880Q6PDB4 577 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 COMMD1Q8N668 190 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 DRAM1Q8N682 238 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 CABLES2Q9BTV7 478 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 PSENENQ9NZ42 101 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 CACNA1DQ01668 2161 aa15.31■□□□□ 0.04
HPS3-202ENST00000460120 SPINK9Q5DT21 86 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms