RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ANKRD60Q9BZ19 345 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 GHITMQ9H3K2 345 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 OR2S2Q9NQN1 319 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 LIN7CQ9NUP9 197 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 PSMB11A5LHX3 300 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 RGS10O43665 173 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 MOSP00540 346 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 HBZP02008 142 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 PF4V1P10720 104 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 HTR2CP28335 458 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 RPS27AP62979 156 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 MORN2Q502X0 79 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 RBM48Q5RL73 367 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 SIGIRRQ6IA17 410 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 LRRTM1Q86UE6 522 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 LYG1Q8N1E2 194 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 ZNF439Q8NDP4 499 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 OR6M1Q8NGM8 313 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 OR4K15Q8NH41 348 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 GALMQ96C23 342 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 EAF1Q96JC9 268 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 CHCHD6Q9BRQ6 235 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 TMED9Q9BVK6 235 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 TM2D1Q9BX74 207 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 TAF9BQ9HBM6 251 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 JPT1Q9UK76 154 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 MGAT4AQ9UM21 535 aa11.53□□□□□ -0.56
NIF3L1-205ENST00000409588 TGP01266 2768 aa11.52□□□□□ -0.56
NIF3L1-205ENST00000409588 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 NCBP2LA6PVI3 153 aaKnown RBP11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 ANKRD65E5RJM6 399 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 G3V4G9 280 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 SLC22A1O15245 554 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 LANCL1O43813 399 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 YPEL1O60688 119 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 MPIG6BO95866 241 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 RCC1P18754 421 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 CD33P20138 364 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 AQP4P55087 323 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 GP2P55259 537 aaKnown RBP11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 MLLT11Q13015 90 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 HNF4GQ14541 408 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 CT45A1Q5HYN5 189 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 TCTEX1D4Q5JR98 221 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 PRSS48Q7RTY5 328 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 SLC35E3Q7Z769 313 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 Q8N6K4 173 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 OR51D1Q8NGF3 324 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 CT45A3Q8NHU0 189 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 YPEL2Q96QA6 119 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 URM1Q9BTM9 101 aaKnown RBP11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 TMEM59Q9BXS4 323 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 ABCG5Q9H222 651 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 ACOT13Q9NPJ3 140 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 ABRACLQ9P1F3 81 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 BLOC1S6Q9UL45 172 aa11.52□□□□□ -0.57
NIF3L1-205ENST00000409588 UBE2QL1A1L167 161 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 SERPINE3A8MV23 424 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 AP4M1O00189 453 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 PF4P02776 101 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 CPEP16870 476 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 CRHBPP24387 322 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 CHATP28329 748 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 ZNF134P52741 427 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 FBLN7Q53RD9 439 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 LIPKQ5VXJ0 399 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 TEX38Q6PEX7 206 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 C1QL4Q86Z23 238 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 PRR18Q8N4B5 295 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 NRG4Q8WWG1 115 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 FAM46BQ96A09 425 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 RASL11BQ9BPW5 248 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 NECAP2Q9NVZ3 263 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 PLXNB1O43157 2135 aa11.51□□□□□ -0.57
NIF3L1-205ENST00000409588 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 TMEM14DPA8MWL7 114 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 ARSBP15848 533 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 MOB1BQ7L9L4 216 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 FAM89BQ8N5H3 189 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 SGCDQ92629 289 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 PLSCR3Q9NRY6 295 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 PLEKHJ1Q9NW61 149 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 STEAP1Q9UHE8 339 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 ZNF580Q9UK33 172 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 HSF4Q9ULV5 492 aa11.5□□□□□ -0.57
NIF3L1-205ENST00000409588 TRBV6-6A0A0A6YYG2 114 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 SLC17A2O00624 439 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 ITGB1BP1O14713 200 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 MRPS14O60783 128 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 HSMCR30P0CW71 290 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms