RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 GPR141Q7Z602 305 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 LINC00311Q8N616 119 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 OR10X1Q8NGY0 326 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 SLC25A46Q96AG3 418 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 GALMQ96C23 342 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 ABCB10Q9NRK6 738 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 RHBDL2Q9NX52 303 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 GABARAPO95166 117 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 CD3GP09693 182 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 COMPP49747 757 aaPredicted RBP16■□□□□ 0.15
PDLIM2-207ENST00000409417 RAB13P51153 203 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 MRPS15P82914 257 aaKnown RBP16■□□□□ 0.15
PDLIM2-207ENST00000409417 MADCAM1Q13477 382 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 CTF1Q16619 201 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 TPTE2P1Q5T6R2 138 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 GPR107Q5VW38 600 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 OR5H6Q8NGV6 325 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 SETD6Q8TBK2 473 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 OCSTAMPQ9BR26 566 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 DNHD1Q96M86 4753 aa16■□□□□ 0.15
PDLIM2-207ENST00000409417 A0A075B6Q4 140 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 A0A1W2PPE3 182 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 SERPINB10P48595 397 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 ARHGDIBP52566 201 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 FOXL1Q12952 345 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 CCDC144NLQ6NUI1 221 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 LIAT1Q6ZQX7 453 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 C5orf24Q7Z6I8 188 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 OR10V1Q8NGI7 309 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 RPEQ96AT9 228 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 NAA50Q9GZZ1 169 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 Q9N2K0 584 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 JPT1Q9UK76 154 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 SPATA2Q9UM82 520 aa15.99■□□□□ 0.15
PDLIM2-207ENST00000409417 LY6EQ16553 131 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 CDNFQ49AH0 187 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 MORN2Q502X0 79 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 SLC25A48Q6ZT89 311 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 ZNF439Q8NDP4 499 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 OR52L2PQ8NGH6 319 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 IL1F10Q8WWZ1 152 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 SLC25A38Q96DW6 304 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 C1RLQ9NZP8 487 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 TCF19Q9Y242 345 aa15.98■□□□□ 0.15
PDLIM2-207ENST00000409417 NDUFA7O95182 113 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 BRS3P32247 399 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 RPL5P46777 297 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 ZNF134P52741 427 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 RELBQ01201 579 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 TAF15Q92804 592 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 TOMM40LQ969M1 308 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 RAB18Q9NP72 206 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 YPEL1O60688 119 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 RGS11O94810 467 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 PPP1CCP36873 323 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 MNDAP41218 407 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 HLA-DRB3P79483 266 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 GNMTQ14749 295 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 CT45A1Q5HYN5 189 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 LY6G6FQ5SQ64 297 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 DHRS7BQ6IAN0 325 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 CT45A3Q8NHU0 189 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 PHF21AQ96BD5 680 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 KCTD12Q96CX2 325 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 YPEL2Q96QA6 119 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 PITPNC1Q9UKF7 332 aa15.97■□□□□ 0.15
PDLIM2-207ENST00000409417 A0A0A6YYH2 397 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 A6NDX4 124 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 A6NJ64 397 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 TRDCB7Z8K6 153 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 SLC31A2O15432 143 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 FCGR3AP08637 254 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 GSTP1P09211 210 aaKnown RBP15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 IL3RAP26951 378 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 RAB7AP51149 207 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 RAG2P55895 527 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 ARFRP1Q13795 201 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 AWAT1Q58HT5 328 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 HACD4Q5VWC8 232 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 OR4F5Q8NH21 305 aa15.96■□□□□ 0.14
PDLIM2-207ENST00000409417 CHST1O43916 411 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 SCTP09683 121 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 TALDO1P37837 337 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 KIR2DS4P43632 304 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 DIAPH2-AS1Q14236 149 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 KIR2DS1Q14954 304 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 CCBE1Q6UXH8 406 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 C12orf54Q6X4T0 127 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 OR8H3Q8N146 312 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 ST6GALNAC6Q969X2 333 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 ABCG5Q9H222 651 aa15.95■□□□□ 0.14
PDLIM2-207ENST00000409417 A0A1W2PPI3 338 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 HSD17B6O14756 317 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 GAPDHP04406 335 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 DTYMKP23919 212 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 RORCP51449 518 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 ZNF137PP52743 207 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 PITPNAQ00169 270 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 ZNF816Q0VGE8 651 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms