RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 KIR3DX1Q9H7L2 352 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 PLPP3O14495 311 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 HYPMO75409 117 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 TUSC2O75896 110 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 SEMA4FO95754 770 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 HAND1O96004 215 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 GRB2P62993 217 aaKnown RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 SCGB2A2Q13296 93 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 EIF3IQ13347 325 aaKnown RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 OR2AE1Q8NHA4 323 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 SLC7A10Q9NS82 523 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 MTCH1Q9NZJ7 389 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 PPP1R3CQ9UQK1 317 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 GJE1A6NN92 205 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 LMO1P25800 156 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 UQCRFS1P47985 274 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 RELBQ01201 579 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 CST6Q15828 149 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 EXT1Q16394 746 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 LRRC75AQ8NAA5 344 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 A0A0J9YY10 115 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 GAGE12BA1L429 117 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 C1QTNF9BB2RNN3 333 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 PEBP1P30086 187 aaKnown RBP9.47□□□□□ -0.89
USP6NL-202ENST00000379237 TSPOP30536 169 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 NHLH1Q02575 133 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 DMWDQ09019 674 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 HLA-BQ31612 363 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 OR4C12Q96R67 309 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
USP6NL-202ENST00000379237 A6NCN8 305 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 SYNGR4O95473 234 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 EDDM3BP56851 147 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 OSR2Q8N2R0 312 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 FGF22Q9HCT0 170 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 CCL28Q9NRJ3 127 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 FAM206AQ9NX38 181 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 CDC42EP3Q9UKI2 254 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 RLFQ13129 1914 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 PGPEP1LA6NFU8 196 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 NUPR1O60356 82 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 C1QTNF9P0C862 333 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 CFPP27918 469 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 VIPR2P41587 438 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 PLAURQ03405 335 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.47□□□□□ -0.89
USP6NL-202ENST00000379237 ZNF542PQ5EBM4 170 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 TEX43Q6ZNM6 134 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 SPPL3Q8TCT6 385 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 PP6455Q8WZ26 134 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
USP6NL-202ENST00000379237 ZSWIM8A7E2V4 1837 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 H3BMH7 237 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 CYR61O00622 381 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 SRIP30626 198 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 COMPP49747 757 aaPredicted RBP9.46□□□□□ -0.89
USP6NL-202ENST00000379237 NSDHLQ15738 373 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 TNFRSF14Q92956 283 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 IGHV2OR16-5A0A0B4J2B6 119 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 PRSS38A1L453 326 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 CEACAM18A8MTB9 384 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 B4DGG1 531 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 H0YIG0 161 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 SH2D1BO14796 132 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 WDR73Q6P4I2 378 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 OR5AS1Q8N127 324 aa9.46□□□□□ -0.89
USP6NL-202ENST00000379237 MRPS17Q9Y2R5 130 aaKnown RBP9.46□□□□□ -0.89
USP6NL-202ENST00000379237 MTCL1Q9Y4B5 1905 aaKnown RBP9.46□□□□□ -0.9
USP6NL-202ENST00000379237 ZNF891A8MT65 544 aaPredicted RBP9.46□□□□□ -0.9
USP6NL-202ENST00000379237 PRRT4C9JH25 899 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 K7EQS6 105 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 ZNF207O43670 478 aaKnown RBP9.46□□□□□ -0.9
USP6NL-202ENST00000379237 CTSSP25774 331 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 SMAGPQ0VAQ4 97 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 SMIM21Q3B7S5 101 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 TIGITQ495A1 244 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.46□□□□□ -0.94e-9■■■■■ 74.4
USP6NL-202ENST00000379237 CCL4L1Q8NHW4 92 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 FGF14Q92915 247 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 NINJ1Q92982 152 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 C18orf12Q96KH6 178 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 ESPL1Q14674 2120 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 SLC17A3O00476 420 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 VENTXO95231 258 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 IGLC2P0DOY2 106 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 IGLC3P0DOY3 106 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 PAX1P15863 534 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 MRPL49Q13405 166 aaKnown RBP9.46□□□□□ -0.9
USP6NL-202ENST00000379237 PIGYQ3MUY2 71 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 OR4D5Q8NGN0 318 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.9
USP6NL-202ENST00000379237 MSI2Q96DH6 328 aaKnown RBP9.46□□□□□ -0.9
USP6NL-202ENST00000379237 PXMP4Q9Y6I8 212 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 FANCMQ8IYD8 2048 aa9.46□□□□□ -0.9
USP6NL-202ENST00000379237 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms