RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ZNF665Q9H7R5 613 aa11□□□□□ -0.65
USP11-204ENST00000377107 MSL2Q9HCI7 577 aa11□□□□□ -0.65
USP11-204ENST00000377107 UBE2L5PA0A1B0GUS4 154 aa11□□□□□ -0.65
USP11-204ENST00000377107 SOX15O60248 233 aa11□□□□□ -0.65
USP11-204ENST00000377107 OR2H2O95918 312 aa11□□□□□ -0.65
USP11-204ENST00000377107 OR3A1P47881 315 aa11□□□□□ -0.65
USP11-204ENST00000377107 AESQ08117 197 aa11□□□□□ -0.65
USP11-204ENST00000377107 TBC1D28Q2M2D7 210 aa11□□□□□ -0.65
USP11-204ENST00000377107 HES3Q5TGS1 186 aa11□□□□□ -0.65
USP11-204ENST00000377107 NECAP1Q8NC96 275 aa11□□□□□ -0.65
USP11-204ENST00000377107 OR5P3Q8WZ94 311 aa11□□□□□ -0.65
USP11-204ENST00000377107 GUCD1Q96NT3 240 aa11□□□□□ -0.65
USP11-204ENST00000377107 VSIRQ9H7M9 311 aa11□□□□□ -0.65
USP11-204ENST00000377107 CTXN2P0C2S0 81 aa11□□□□□ -0.65
USP11-204ENST00000377107 PMELP40967 661 aa11□□□□□ -0.65
USP11-204ENST00000377107 DLK1P80370 383 aa11□□□□□ -0.65
USP11-204ENST00000377107 TLE4Q04727 773 aa11□□□□□ -0.65
USP11-204ENST00000377107 DAZAP2Q15038 168 aaPredicted RBP11□□□□□ -0.65
USP11-204ENST00000377107 OR8G1Q15617 311 aa11□□□□□ -0.65
USP11-204ENST00000377107 VHLLQ6RSH7 139 aa11□□□□□ -0.65
USP11-204ENST00000377107 PLPPR1Q8TBJ4 325 aa11□□□□□ -0.65
USP11-204ENST00000377107 NINJ1Q92982 152 aa11□□□□□ -0.65
USP11-204ENST00000377107 DUSP13Q9UII6 198 aa11□□□□□ -0.65
USP11-204ENST00000377107 ACACAQ13085 2346 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 A0A1W2PNU3 283 aaPredicted RBP10.99□□□□□ -0.65
USP11-204ENST00000377107 K7N7A8 449 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 NDUFA2O43678 99 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 NAPSAO96009 420 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 HLA-DRB3P79483 266 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 LRTM2Q8N967 370 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 SLC25A40Q8TBP6 338 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 MRGPRDQ8TDS7 321 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 NANOS1Q8WY41 292 aaKnown RBP10.99□□□□□ -0.65
USP11-204ENST00000377107 CYB5BO43169 146 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 ACAA1P09110 424 aaPredicted RBP10.99□□□□□ -0.65
USP11-204ENST00000377107 PPP1CBP62140 327 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 SRSF6Q13247 344 aaKnown RBP10.99□□□□□ -0.65
USP11-204ENST00000377107 MRPL49Q13405 166 aaKnown RBP10.99□□□□□ -0.65
USP11-204ENST00000377107 RHEBQ15382 184 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 SCCPDHQ8NBX0 429 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 KCNIP1Q9NZI2 227 aa10.99□□□□□ -0.65
USP11-204ENST00000377107 KLF13Q9Y2Y9 288 aaPredicted RBP10.99□□□□□ -0.65
USP11-204ENST00000377107 SMCO3A2RU48 225 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 PITX3O75364 302 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 ACP1P24666 158 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 G6PCP35575 357 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 ZNF766Q5HY98 468 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 ZNF787Q6DD87 383 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 LFNGQ8NES3 379 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 RBMXL1Q96E39 390 aaKnown RBP10.98□□□□□ -0.65
USP11-204ENST00000377107 GNPNAT1Q96EK6 184 aaPredicted RBP10.98□□□□□ -0.65
USP11-204ENST00000377107 TAAR3PQ9P1P4 343 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 SYNGR2O43760 224 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 WISP2O76076 250 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 IL18BPO95998 194 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 UCP1P25874 307 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 RNFT1Q5M7Z0 435 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 OR1L1Q8NH94 360 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 OR2D2Q9H210 308 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 IFNA17P01571 189 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 DEFA4P12838 97 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 SOX8P57073 446 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 FBXW9Q5XUX1 488 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 OR52L2PQ8NGH6 319 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 TCTEX1D2Q8WW35 142 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 TMEM56Q96MV1 263 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 ATP5SQ99766 215 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 RPRMQ9NS64 109 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 TMEM56-RWDD3S4R434 201 aa10.98□□□□□ -0.65
USP11-204ENST00000377107 CLEC18AA5D8T8 446 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 RAC2P15153 192 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 COLCA1Q6ZS62 124 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 COMMD1Q8N668 190 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 CLEC18CQ8NCF0 446 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 RPUSD4Q96CM3 377 aaKnown RBP10.97□□□□□ -0.65
USP11-204ENST00000377107 SDSLQ96GA7 329 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 KIAA1324LA8MWY0 1029 aaPredicted RBP10.97□□□□□ -0.65
USP11-204ENST00000377107 PRSS44E7EML9 344 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 TIMM8AO60220 97 aaPredicted RBP10.97□□□□□ -0.65
USP11-204ENST00000377107 MMP9P14780 707 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 RPS23P62266 143 aaKnown RBP10.97□□□□□ -0.65
USP11-204ENST00000377107 TGFBR3Q03167 851 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 RNPS1Q15287 305 aaKnown RBP10.97□□□□□ -0.65
USP11-204ENST00000377107 Q6ZSR3 168 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 TMEM45BQ96B21 275 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 CLN8Q9UBY8 286 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 FAM157AC9JC47 383 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 H0Y980 276 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 SH2D1BO14796 132 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 CD55P08174 381 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 NMSQ5H8A3 153 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 PCSK4Q6UW60 755 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 FER1L6-AS2Q96M78 137 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 SLC25A22Q9H936 323 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 ATPIF1Q9UII2 106 aa10.97□□□□□ -0.65
USP11-204ENST00000377107 MPC1Q9Y5U8 109 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms