RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 LDLRAD4O15165 306 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 LYL1P12980 280 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 GPR6P46095 362 aaPredicted RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 PPDPFLQ8WWR9 84 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 RNF166Q96A37 237 aaPredicted RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 LGALS1P09382 135 aaKnown RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 C10orf113Q5VZT2 155 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 RBPMS2Q6ZRY4 209 aaKnown RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 RNF126Q9BV68 326 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 MRM2Q9UI43 246 aaKnown RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 IGKV6D-21A0A0A0MT36 114 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 CSN3P07498 182 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 TP53INP2Q8IXH6 220 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 WBP2Q969T9 261 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 HS3ST3B1Q9Y662 390 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 HYPMO75409 117 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 WDR31Q8NA23 367 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 PAXXQ9BUH6 204 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 GDF1P27539 372 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 ZNF788Q6ZQV5 615 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 TMEM40Q8WWA1 233 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 MRPL27Q9P0M9 148 aaKnown RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 TRBV5-5A0A0J9YX44 114 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 TSPAN2O60636 221 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 GABRG2P18507 467 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 ZP1P60852 638 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 SRSF1Q07955 248 aaKnown RBP eCLIP5.79□□□□□ -1.486e-10■■■□□ 15.3
UBR4-204ENST00000375254 SPEM1Q8N4L4 309 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 ZNF502Q8TBZ5 544 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 GPR27Q9NS67 375 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 LY96Q9Y6Y9 160 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 OTPQ5XKR4 325 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 WNT10AQ9GZT5 417 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 TNFRSF12AQ9NP84 129 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 FSTP19883 344 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 GZMMP51124 257 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 KLF16Q9BXK1 252 aaPredicted RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 FAM117AQ9C073 453 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 ST6GALNAC2Q9UJ37 374 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 PRSS47A8MTI9 375 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 STATHP02808 62 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 PSG1P11464 419 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 INSL4Q14641 139 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 TBR1Q16650 682 aa5.79□□□□□ -1.48
UBR4-204ENST00000375254 METTL27Q8N6F8 245 aaPredicted RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 SPACA9Q96E40 222 aaPredicted RBP5.79□□□□□ -1.48
UBR4-204ENST00000375254 GAGE2AQ6NT46 116 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 CFAP43Q8NDM7 1665 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 CCL16O15467 120 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 KRTCAP3Q53RY4 240 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 GVQW1Q8N7I0 195 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A10PA6NDY2 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A18PA6NE21 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A16PA6NEW6 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A20PA6NIJ5 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A8PA6NJQ4 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A7PA6NKC0 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A22PA8MWA6 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A12PA8MX19 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A5PA8MXJ8 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A23PA8MXZ1 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 LDB3O75112 727 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A15PP0C7V4 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A13PP0C7W8 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A14PP0C7W9 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM90A24PP0C7X0 464 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 SCD5Q86SK9 330 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 MSRB3Q8IXL7 192 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 TIMM8AO60220 97 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 EXOSC7Q15024 291 aaKnown RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 ZNF141Q15928 474 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 MORN4Q8NDC4 146 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 SLIT2O94813 1529 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 HOXA4Q00056 320 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.78□□□□□ -1.487e-8■■■■□ 21.8
UBR4-204ENST00000375254 ZNF418Q8TF45 676 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 RAE1P78406 368 aaKnown RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 LHX8Q68G74 356 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 MVB12AQ96EY5 273 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 ALOX12BO75342 701 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 CAPZBP47756 277 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 ATOH7Q8N100 152 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 LOC105371242A0A075B767 164 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 PPIAL4CA0A0B4J2A2 164 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 C8orf88P0DMB2 117 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 PPIAL4GP0DN37 164 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 FAM110CQ1W6H9 321 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 CADM4Q8NFZ8 388 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 MRPL32Q9BYC8 188 aaKnown RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 SEMA5BQ9P283 1151 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 BCL6BQ8N143 479 aaPredicted RBP5.78□□□□□ -1.48
UBR4-204ENST00000375254 PIGTQ969N2 578 aa5.78□□□□□ -1.48
UBR4-204ENST00000375254 LAMC1P11047 1609 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms