RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PATE4P0C8F1 98 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 CCL2P13500 99 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 MRPS11P82912 194 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 COL5A1-AS1Q5SY13 56 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 ASB5Q8WWX0 329 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 NRIP2Q9BQI9 281 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 ABHD14AQ9BUJ0 271 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 CCL28Q9NRJ3 127 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 A0A1B0GU03 582 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 SRSF10O75494 262 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 APCSP02743 223 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 RPL30P62888 115 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 SKP2Q13309 424 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 TMEM255AQ5JRV8 349 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 TMEM211Q6ICI0 200 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 ZAR1Q86SH2 424 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 ZNF721Q8TF20 911 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 SSMEM1Q8WWF3 244 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 HSF4Q9ULV5 492 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 HEATR5BQ9P2D3 2071 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 RP1L1Q8IWN7 2480 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 CXorf1O96002 111 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 ATP6V0CP27449 155 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 TNFAIP6P98066 277 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 C9orf40Q8IXQ3 194 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 TBX15Q96SF7 602 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 MRPS18AQ9NVS2 196 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 KLF3P57682 345 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 OR52L2PQ8NGH6 319 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 PERPQ96FX8 193 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 TCF21O43680 179 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 VSIG8P0DPA2 414 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 PMELP40967 661 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 TNXAQ16473 311 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 TMEM65Q6PI78 240 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 ZDHHC16Q969W1 377 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 TP53RKQ96S44 253 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 VSIG4Q9Y279 399 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 SCN5AQ14524 2016 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 TMEM229AB2RXF0 380 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 PITX3O75364 302 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 SLC35E4Q6ICL7 350 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 PPP1R3EQ9H7J1 279 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 GCM2O75603 506 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 HIST1H1EP10412 219 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 ACP1P24666 158 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 RAC3P60763 192 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 PRDM6Q9NQX0 595 aa10.73□□□□□ -0.69
NPLOC4-202ENST00000374747 LIPT2A6NK58 231 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 CD40P25942 277 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 CEACAM3P40198 252 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 HFEQ30201 348 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 LILRB1Q8NHL6 650 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 MRGPRFQ96AM1 343 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 SMIM10L1P0DMW3 83 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 CXCL2P19875 107 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 PRSS12P56730 875 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 PAFAH1B2P68402 229 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 SRSF9Q13242 221 aaKnown RBP eCLIP10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 H1FOOQ8IZA3 346 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 OR2D3Q8NGH3 330 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 SMIM10Q96HG1 83 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 F12P00748 615 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 IGHV3-13P01766 116 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 IGHV3-7P01780 117 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 NMBP08949 121 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 FGF5P12034 268 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 ZNF273Q14593 569 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 C16orf82Q7Z2V1 217 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 LRRC75AQ8NAA5 344 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 SF3B5Q9BWJ5 86 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 NTN1O95631 604 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 SP9P0CG40 484 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 C1QL3Q5VWW1 255 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 WDFY1Q8IWB7 410 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 FAM181AQ8N9Y4 354 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 PTX4Q96A99 478 aa10.72□□□□□ -0.69
NPLOC4-202ENST00000374747 NGFRP08138 427 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 TMIGD3P0DMS9 266 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 MUC1P15941 1255 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 TMEM50BP56557 158 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 GUCA2BQ16661 112 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 GFRALQ6UXV0 394 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 HOGA1Q86XE5 327 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 STXBP6Q8NFX7 210 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 ST6GALNAC2Q9UJ37 374 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 DTX4Q9Y2E6 619 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 ANAPC1Q9H1A4 1944 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 SCN2AQ99250 2005 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 RHBDL1O75783 438 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 BCL2P10415 239 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 RCC1P18754 421 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 BRS3P32247 399 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 EFNB2P52799 333 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms