RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 LINC01006Q8NI28 216 aa14.9□□□□□ -0.02
CHTOP-202ENST00000368687 OR51E2Q9H255 320 aa14.9□□□□□ -0.02
CHTOP-202ENST00000368687 OR2S2Q9NQN1 319 aa14.9□□□□□ -0.02
CHTOP-202ENST00000368687 M0QZK8 103 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 JUNBP17275 347 aaPredicted RBP14.89□□□□□ -0.03
CHTOP-202ENST00000368687 PAX6P26367 422 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 ZNF816Q0VGE8 651 aaPredicted RBP14.89□□□□□ -0.03
CHTOP-202ENST00000368687 HMGN3Q15651 99 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 SFXN4Q6P4A7 337 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 ZNF880Q6PDB4 577 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 THNSL2Q86YJ6 484 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 CROCCP3Q8IVE0 287 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 SGMS2Q8NHU3 365 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 WFDC12Q8WWY7 111 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 LEAP2Q969E1 77 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 RAB3CQ96E17 227 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 CENPOQ9BU64 300 aa14.89□□□□□ -0.03
CHTOP-202ENST00000368687 TRIM64CA6NLI5 447 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 SERPINE3A8MV23 424 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 HSD17B6O14756 317 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 GAPDHP04406 335 aaKnown RBP14.88□□□□□ -0.03
CHTOP-202ENST00000368687 SDC2P34741 201 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 RAB13P51153 203 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 ZNF137PP52743 207 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 SLC25A48Q6ZT89 311 aaKnown RBP14.88□□□□□ -0.03
CHTOP-202ENST00000368687 OR10R2Q8NGX6 335 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 OR1L1Q8NH94 360 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 ARHGAP5-AS1Q96IT6 56 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 CMSS1Q9BQ75 279 aaKnown RBP14.88□□□□□ -0.03
CHTOP-202ENST00000368687 PECRQ9BY49 303 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 AK3Q9UIJ7 227 aa14.88□□□□□ -0.03
CHTOP-202ENST00000368687 CHST1O43916 411 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 AIREO43918 545 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 YPEL1O60688 119 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 IGHV3-7P01780 117 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 TMEM50BP56557 158 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 PROK1P58294 105 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 NR2C2APQ86WQ0 139 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 YPEL2Q96QA6 119 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 PRSS22Q9GZN4 317 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 DAPK2Q9UIK4 370 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 ETV7Q9Y603 341 aa14.87□□□□□ -0.03
CHTOP-202ENST00000368687 IGHV3-43A0A0B4J1X8 118 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 OR2F2O95006 317 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 CD3GP09693 182 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 IGHV3-43DP0DP04 118 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 MORN2Q502X0 79 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 UTF1Q5T230 341 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 CCBE1Q6UXH8 406 aaPredicted RBP14.86□□□□□ -0.03
CHTOP-202ENST00000368687 TMEM219Q86XT9 240 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 Q8N2B8 174 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 ZNF439Q8NDP4 499 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 UBALD1Q8TB05 177 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 SETD6Q8TBK2 473 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 TAF15Q92804 592 aaKnown RBP eCLIP14.86□□□□□ -0.03
CHTOP-202ENST00000368687 ABHD14AQ9BUJ0 271 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 GHITMQ9H3K2 345 aa14.86□□□□□ -0.03
CHTOP-202ENST00000368687 A0A1W2PPI3 338 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 RAB27BO00194 218 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 TIMM23O14925 209 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 DIRAS3O95661 229 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 HIST1H1DP16402 221 aaKnown RBP14.85□□□□□ -0.03
CHTOP-202ENST00000368687 HABP2Q14520 560 aaPredicted RBP14.85□□□□□ -0.03
CHTOP-202ENST00000368687 KIR2DS1Q14954 304 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 PLAC9Q5JTB6 97 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 OR2AK2Q8NG84 335 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 OR10V1Q8NGI7 309 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 IL1F10Q8WWZ1 152 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 YIPF6Q96EC8 236 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 RBM14Q96PK6 669 aaKnown RBP14.85□□□□□ -0.03
CHTOP-202ENST00000368687 ATG5Q9H1Y0 275 aa14.85□□□□□ -0.03
CHTOP-202ENST00000368687 FAM90A9PA6NNJ1 464 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 MFNGO00587 321 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 ITGB1BP1O14713 200 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 SLC2A2P11168 524 aaPredicted RBP14.84□□□□□ -0.03
CHTOP-202ENST00000368687 ZBTB25P24278 435 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 SERPINB10P48595 397 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 EFNB2P52799 333 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 HLA-DRB3P79483 266 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 MXD1Q05195 221 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 OR56B4Q8NH76 319 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 RTN4IP1Q8WWV3 396 aaPredicted RBP14.84□□□□□ -0.03
CHTOP-202ENST00000368687 EDARADDQ8WWZ3 215 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 ST6GALNAC6Q969X2 333 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 PHF21AQ96BD5 680 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 CITED1Q99966 193 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 SLC25A33Q9BSK2 321 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 Q9N2K0 584 aa14.84□□□□□ -0.03
CHTOP-202ENST00000368687 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHTOP-202ENST00000368687 A0A0A6YYH2 397 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 IGHV1-3A0A0C4DH29 117 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 A0A1W2PPE3 182 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 SMIM30A4D0T7 59 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 A6NJ64 397 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 LANCL1O43813 399 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 PITPNAQ00169 270 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 SRSF7Q16629 238 aaKnown RBP eCLIP14.83□□□□□ -0.04
CHTOP-202ENST00000368687 CT45A1Q5HYN5 189 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 FAM71F2Q6NXP2 309 aa14.83□□□□□ -0.04
CHTOP-202ENST00000368687 TGIF2LXQ8IUE1 241 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms