RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ODF3L1Q8IXM7 274 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 OR2T10Q8NGZ9 312 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 VCXQ9H320 206 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 DUSP21Q9H596 190 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TAF9BQ9HBM6 251 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 RAB9BQ9NP90 201 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 AURKAIP1Q9NWT8 199 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 COL7A1Q02388 2944 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SLC22A1O15245 554 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TXNL1O43396 289 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MOSP00540 346 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 UCHL1P09936 223 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SRMP19623 302 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 IL3RAP26951 378 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CHATP28329 748 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GPR12P47775 334 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 AQP4P55087 323 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RPL23AP62750 156 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RPS27AP62979 156 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 HTD2P86397 168 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 UNC119Q13432 240 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LY6G6FQ5SQ64 297 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR10K2Q6IF99 312 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SLC35E3Q7Z769 313 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 STPG2Q8N412 459 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR10V1Q8NGI7 309 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RBMXL1Q96E39 390 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RCC1LQ96I51 464 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SULT4A1Q9BR01 284 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TMED9Q9BVK6 235 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TM2D1Q9BX74 207 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CST11Q9H112 138 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GNG12Q9UBI6 72 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LINC00527Q9UJ94 153 aa10.77□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SERPINE3A8MV23 424 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TMEM14DPA8MWL7 114 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LANCL1O43813 399 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MPIG6BO95866 241 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MYF6P23409 242 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 HTR2CP28335 458 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 THBS3P49746 956 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 F2RL1P55085 397 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TPBGQ13641 420 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GLT8D1Q68CQ7 371 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TMEM91Q6ZNR0 172 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR2W3Q7Z3T1 314 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CEACAM19Q7Z692 300 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 PRR18Q8N4B5 295 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 COMMD1Q8N668 190 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR52L2PQ8NGH6 319 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 S1PR3Q99500 378 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GFI1Q99684 422 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ISYNA1Q9NPH2 558 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ZFP57Q9NU63 452 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SCN3BQ9NY72 215 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 JPT1Q9UK76 154 aa10.76□□□□□ -0.69
TNFRSF1A-202ENST00000366159 NCBP2LA6PVI3 153 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 YPEL1O60688 119 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 NAPSAO96009 420 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 PF4P02776 101 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SLC6A1P30531 599 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CFHR3Q02985 330 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GNMTQ14749 295 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MED22Q15528 200 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 HMGN3Q15651 99 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ZNF880Q6PDB4 577 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FOXRED2Q8IWF2 684 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MRPL41Q8IXM3 137 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RNF152Q8N8N0 203 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 KCNG3Q8TAE7 436 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 YPEL2Q96QA6 119 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 NICN1Q9BSH3 213 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FAAP24Q9BTP7 215 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ANKRD60Q9BZ19 345 aa10.75□□□□□ -0.69
TNFRSF1A-202ENST00000366159 DNAH9Q9NYC9 4486 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 A0A0A6YYD4 124 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 AP4M1O00189 453 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 DUS4LO95620 317 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 KRTAP10-11P60412 298 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LSAMPQ13449 338 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 HSD17B12Q53GQ0 312 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RBM48Q5RL73 367 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LIPKQ5VXJ0 399 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 C6orf201Q7Z4U5 140 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FAM89BQ8N5H3 189 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 P2RX4Q99571 388 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 HSPB9Q9BQS6 159 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TMEM59Q9BXS4 323 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 KCNIP1Q9NZI2 227 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms