RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 P2RX4Q99571 388 aa10.98□□□□□ -0.65
DNMT3A-202ENST00000321117 OR2D2Q9H210 308 aa10.98□□□□□ -0.65
DNMT3A-202ENST00000321117 CISD1Q9NZ45 108 aaKnown RBP10.98□□□□□ -0.65
DNMT3A-202ENST00000321117 WNT16Q9UBV4 365 aa10.98□□□□□ -0.65
DNMT3A-202ENST00000321117 PAGE4O60829 102 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 MMP7P09237 267 aaPredicted RBP10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 RAB9BQ9NP90 201 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 TCAPO15273 167 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 CCL4P13236 92 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 CCKARP32238 428 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 GPR12P47775 334 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 TOMM20LQ6UXN7 152 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 IL22RA2Q969J5 263 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 WNT5BQ9H1J7 359 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 CHCHD2Q9Y6H1 151 aaPredicted RBP10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 C11orf94C9JXX5 98 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 UCP1P25874 307 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 OR3A1P47881 315 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 MZT1Q08AG7 82 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 CEACAM21Q3KPI0 293 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 OR4C12Q96R67 309 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 SRXN1Q9BYN0 137 aa10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 PTPRZ1P23471 2315 aaPredicted RBP10.97□□□□□ -0.65
DNMT3A-202ENST00000321117 SHISA7A6NL88 538 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 KLRC4-KLRK1H3BQV0 150 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 PMELP40967 661 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 ICAM4Q14773 271 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 SPINK9Q5DT21 86 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 CALHM1Q8IU99 346 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 OR1P1Q8NH06 330 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 PNRC2Q9NPJ4 139 aaKnown RBP10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 FSCN3Q9NQT6 498 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 SVILO95425 2214 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 SYNGR3O43761 229 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 FAM3BP58499 235 aaPredicted RBP10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 CLDND2Q8NHS1 167 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 ANAPC10Q9UM13 185 aa10.96□□□□□ -0.65
DNMT3A-202ENST00000321117 A0A1B0GV90 55 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BKO60814 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BJP06899 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BOP23527 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HOXA6P31267 233 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BBP33778 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BDP58876 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 STARD6P59095 220 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 TPPP2P59282 170 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BCP62807 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 ELOBQ15370 118 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 TUSC5Q8IXB3 177 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 TXN2Q99757 166 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 FAM173AQ9BQD7 235 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 DOCK8Q8NF50 2099 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 MYO7BQ6PIF6 2116 aa10.96□□□□□ -0.66
DNMT3A-202ENST00000321117 hCG_38984A0A1B0GV85 526 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 GYPAP02724 150 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST1H3AP68431 136 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 CFHR1Q03591 330 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 RIPPLY2Q5TAB7 128 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 REC114Q7Z4M0 266 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 OR4D5Q8NGN0 318 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 ZDHHC8Q9ULC8 765 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 IGLV3-12A0A075B6K2 115 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 J3QT63 122 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 SYNGR1O43759 233 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 CTAG1AP78358 180 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 C21orf62-AS1Q17RA5 79 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 SPNS3Q6ZMD2 512 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 RFESDQ8TAC1 157 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 DTD1Q8TEA8 209 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 RCC1LQ96I51 464 aaKnown RBP10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 PCGF1Q9BSM1 259 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 RBKSQ9H477 322 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 ZNF586Q9NXT0 402 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 TIMM8BQ9Y5J9 83 aaPredicted RBP10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 ESPL1Q14674 2120 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 IGLV3-32A0A0A0MS00 114 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 ARGFXA6NJG6 315 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 MGST1P10620 155 aaKnown RBP10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 SIGLECL1Q8N7X8 197 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 TMEM56Q96MV1 263 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 FKBP11Q9NYL4 201 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 TMEM56-RWDD3S4R434 201 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 SHANK1Q9Y566 2161 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 PMS2P1A4D2B8 440 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 M0R143 59 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 CYC1P08574 325 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 PCOLCEQ15113 449 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 LINC00596Q86U02 117 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 FADS6Q8N9I5 356 aa10.95□□□□□ -0.66
DNMT3A-202ENST00000321117 EDARADDQ8WWZ3 215 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms