RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PTHLHP12272 177 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 GABRG2P18507 467 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 NUTF2P61970 127 aaKnown RBP10.63□□□□□ -0.71
PCF11-201ENST00000298281 SNRPD3P62318 126 aaKnown RBP10.63□□□□□ -0.71
PCF11-201ENST00000298281 ABLIM2Q6H8Q1 611 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 FAM89BQ8N5H3 189 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 LINC00470Q9BZP3 86 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 OR2W1Q9Y3N9 320 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 OR4C45A6NMZ5 311 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 ZNF658BQ4V348 819 aaPredicted RBP10.63□□□□□ -0.71
PCF11-201ENST00000298281 ACER2Q5QJU3 275 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 DPPA3Q6W0C5 159 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 RNF165Q6ZSG1 346 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 C1orf162Q8NEQ5 155 aaPredicted RBP10.63□□□□□ -0.71
PCF11-201ENST00000298281 ABHD14BQ96IU4 210 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 PLEKHB1Q9UF11 243 aaPredicted RBP10.63□□□□□ -0.71
PCF11-201ENST00000298281 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
PCF11-201ENST00000298281 A0A087X0M5 115 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 A0A1B0GX30 115 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 C2CD4DB7Z1M9 353 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 PYCARD-AS1I3L0S3 204 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 TCF21O43680 179 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 REG1BP48304 166 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 C2orf83Q53S99 150 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 ANAPC16Q96DE5 110 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 HIGD1AQ9Y241 93 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 A0A1W2PRX2 142 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 TMEM136Q6ZRR5 245 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 C10orf35Q96D05 121 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 VN1R1Q9GZP7 353 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 RBKSQ9H477 322 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 FSCN3Q9NQT6 498 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 KCNE1BA0A087WTH5 132 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 C11orf94C9JXX5 98 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 CTSSP25774 331 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 MTFP1Q9UDX5 166 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 TRAV12-3A0A0B4J271 114 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 RBM11P57052 281 aaKnown RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 KRTCAP3Q53RY4 240 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 SPICQ8N5J4 248 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 MRPS11P82912 194 aaKnown RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 OR1L8Q8NGR8 309 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 ITLN2Q8WWU7 325 aaPredicted RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 CDX2Q99626 313 aaPredicted RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 CNTFRP26992 372 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 CLPPQ16740 277 aaPredicted RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 GPR82Q96P67 336 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 C7orf71A4D174 169 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 SPINK14Q6IE38 97 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 KBTBD11O94819 623 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 PNRC1Q12796 327 aaPredicted RBP10.62□□□□□ -0.71
PCF11-201ENST00000298281 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 OR5AN1Q8NGI8 311 aa10.62□□□□□ -0.71
PCF11-201ENST00000298281 MPLP40238 635 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 IER3P46695 156 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 MOGAT3Q86VF5 341 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 R3HDM4Q96D70 268 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 ASB1Q9Y576 335 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 GPX1P07203 203 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 TDGF1P3P51864 188 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 DEFB121Q5J5C9 76 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 CXorf66Q5JRM2 361 aaPredicted RBP10.61□□□□□ -0.71
PCF11-201ENST00000298281 TEX30Q5JUR7 227 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 OR10AC1Q8NH08 325 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 AKIP1Q9NQ31 210 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 AVPR2P30518 371 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 SLC25A35Q3KQZ1 300 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 ZNF117Q03924 483 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 FAM106AQ4KMX7 169 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 FXYD1O00168 92 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 SFT2D2O95562 160 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 ACAA1P09110 424 aaPredicted RBP10.61□□□□□ -0.71
PCF11-201ENST00000298281 CX3CL1P78423 397 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 IL24Q13007 206 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 S1PR2O95136 353 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 CRPP02741 224 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 HPXP02790 462 aa10.61□□□□□ -0.71
PCF11-201ENST00000298281 CASP8AP2Q9UKL3 1982 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 IGLV3-16A0A075B6K0 115 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 WDR38Q5JTN6 314 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 CD300LDQ6UXZ3 194 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 FAM24BQ8N5W8 94 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 SOSTQ9BQB4 213 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 HDHD3Q9BSH5 251 aaPredicted RBP10.6□□□□□ -0.71
PCF11-201ENST00000298281 BTAF1O14981 1849 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 THADAQ6YHU6 1953 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 CHST1O43916 411 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 SNRPCP09234 159 aaKnown RBP10.6□□□□□ -0.71
PCF11-201ENST00000298281 ZNF32P17041 273 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 SPINK2P20155 84 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 CCR2P41597 374 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 CDKN2AP42771 156 aaKnown RBP10.6□□□□□ -0.71
PCF11-201ENST00000298281 GALNT14Q96FL9 552 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms