RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Rhox4gQ2MDF7 205 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rhox4dQ2MDG0 205 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rhox4eQ504P9 205 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1357Q7TQU7 313 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mus81Q91ZJ0 551 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rhox4bQ9JI43 205 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Zfhx2Q2MHN3 2562 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Zfp870J3QMA4 560 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Sh2d1bO35324 132 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 S100a10P08207 97 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ctf2P83714 204 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Btg2Q04211 158 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 TMEM229BQ8BFQ2 167 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Acer2Q8VD53 275 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r44Q9EQ47 310 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Suv39h2Q9EQQ0 477 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ccr9Q9WUT7 369 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r180B9EK86 305 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr914E9PW59 316 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm20834J3QM72 227 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 H2al1oL7MU04 110 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tmem211Q3UUA0 195 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm5771Q792Y9 245 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 LmlnQ8BMN4 681 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 B3gnt9Q8VI16 399 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Syt11Q9R0N3 430 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Scgb1b10A0A087WPW0 93 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr911-ps1A0A140T8K0 311 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1039A2ARY0 319 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tfap2eQ6VUP9 442 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Clec4a1Q80UI7 245 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Pqlc2Q8C4N4 293 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Cdc42ep2Q8JZX9 214 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Sp7Q8VI67 428 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr878Q9EQA9 314 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Trav12n-2A0A075B626 113 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Cldn34dA2AGU5 210 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm5239D3YYZ2 122 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm6576F6YTZ4 274 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 DhodhO35435 395 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ier2P17950 221 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Guca2aP33680 116 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ctsll3Q3ULP7 331 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr453Q7TRV7 317 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Zfp947Q8BIQ6 437 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Znf768Q8R0T2 568 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1241Q8VF91 314 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Q9DAE8 263 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Avpr2O88721 371 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 P01637 128 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Hmx3P42581 356 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Sft2d1Q5SSN7 159 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rph3alQ768S4 302 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ell3Q80VR2 395 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 LssQ8BLN5 733 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr469Q8VF66 314 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr995Q8VF74 315 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1384Q8VFA8 318 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr578Q8VH17 313 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Nudt16l1Q8VHN8 211 aaKnown RBP13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 GhsrQ99P50 364 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Clec6aQ9JKF4 209 aa13.8□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 PtprfA2A8L5 1898 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Csf3P09920 208 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Adrb2P18762 418 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Slc7a15Q50E62 488 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 GgnQ80WJ1 673 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 RydenQ8CAK3 290 aaKnown RBP13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 NubplQ9CWD8 319 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Sun5Q9DA32 373 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 NagkQ9QZ08 343 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Fbxw27A0A1D5RLF0 466 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr555E9Q547 315 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Sult2a5K7N6K9 285 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 RbpjP31266 526 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Bmp8aP34821 399 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Bmp8bP55105 399 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Wbp1lQ8BGW2 348 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 PigcQ9CXR4 297 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Zfp760E9QAF5 666 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ifna7P06799 190 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mep1aP28825 747 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr452Q7TRV8 317 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1079Q8VF52 315 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr994Q8VF73 314 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr38Q8VGP4 317 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Arpc1bQ9WV32 372 aaKnown RBP13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 SstP60041 116 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vash2Q8C5G2 355 aa13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mrps18cQ8R2L5 143 aaKnown RBP13.79□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm4779A0A1B0GR91 561 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1055A2AVX9 346 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Smim15Q3UTD9 74 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mfsd4b1Q8VCV9 425 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 CdiptQ8VDP6 213 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr281Q8VET6 311 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr46Q8VGJ4 318 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tctex1d2Q9CQ66 144 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Scp2d1Q9DAH1 156 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms