RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 ASCC1Q8N9N2 400 aaKnown RBP15.94■□□□□ 0.14
CNOT9-209ENST00000627282 MITD1Q8WV92 249 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 RAB1CQ92928 201 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 TIMD4Q96H15 378 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 ZNF488Q96MN9 340 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 GON7Q9BXV9 100 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 WDR13Q9H1Z4 485 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 C5orf66Q9H5L9 145 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 ZNF286AQ9HBT8 521 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 NECAP2Q9NVZ3 263 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 HSPB11Q9Y547 144 aa15.94■□□□□ 0.14
CNOT9-209ENST00000627282 ABCA2Q9BZC7 2435 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 PGA5P0DJD9 388 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 AKR1C4P17516 323 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 H2BFSP57053 126 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 KRTAP1-1Q07627 177 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 SRSF7Q16629 238 aaKnown RBP eCLIP15.93■□□□□ 0.14
CNOT9-209ENST00000627282 RTBDNQ9BSG5 229 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-209ENST00000627282 SPACA1Q9HBV2 294 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 IL36RNQ9UBH0 155 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 POLDIP2Q9Y2S7 368 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 CR1P17927 2039 aa15.93■□□□□ 0.14
CNOT9-209ENST00000627282 PPIAL4EA0A075B759 164 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 OR5H14A6NHG9 310 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 PPIAL4DF5H284 164 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 GLAP06280 429 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 PPIAL4FP0DN26 164 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 HLA-GP17693 338 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 GMFBP60983 142 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 IL13RA1P78552 427 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 IKZF1Q13422 519 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 TMEM128Q5BJH2 165 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 ZNF660Q6AZW8 331 aaPredicted RBP15.92■□□□□ 0.14
CNOT9-209ENST00000627282 DHRS11Q6UWP2 260 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 Q6ZS49 121 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 Q8IYB0 196 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 POC1AQ8NBT0 407 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 TMEM230Q96A57 120 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 NRIP2Q9BQI9 281 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 ZNF2Q9BSG1 426 aaPredicted RBP15.92■□□□□ 0.14
CNOT9-209ENST00000627282 NARFLQ9H6Q4 476 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 IFT22Q9H7X7 185 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 TMEM165Q9HC07 324 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 OPN4Q9UHM6 478 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 PPIAL4AQ9Y536 164 aa15.92■□□□□ 0.14
CNOT9-209ENST00000627282 ABCA1O95477 2261 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 LGALS8O00214 317 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 NOS1APO75052 506 aaPredicted RBP15.91■□□□□ 0.14
CNOT9-209ENST00000627282 RGS11O94810 467 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 FSTL3O95633 263 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 ACAA1P09110 424 aaPredicted RBP15.91■□□□□ 0.14
CNOT9-209ENST00000627282 OR5H8P0DN80 308 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 ERVK11-1P61568 191 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 DCAF12L2Q5VW00 463 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 LPCAT3Q6P1A2 487 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 C11orf88Q6PI97 169 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 DEFB108BQ8NET1 73 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 WDR89Q96FK6 387 aaPredicted RBP15.91■□□□□ 0.14
CNOT9-209ENST00000627282 PHB2Q99623 299 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 TMPRSS13Q9BYE2 586 aa15.91■□□□□ 0.14
CNOT9-209ENST00000627282 IGHV3OR15-7A0A075B7D8 119 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 OOEPA6NGQ2 149 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 MCRIP1C9JLW8 97 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 DUS4LO95620 317 aaKnown RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 HOXB4P17483 251 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 USF1P22415 310 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 MDH2P40926 338 aaKnown RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 SRSF4Q08170 494 aaKnown RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 LOXL1Q08397 574 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 LY6G6FQ5SQ64 297 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 TEX36Q5VZQ5 186 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 Q6ZPA2 131 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 FAM90A1Q86YD7 464 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 OR5M8Q8NGP6 311 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 SONP18583 2426 aaKnown RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 SFT2D2O95562 160 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 NAPSAO96009 420 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 GLRA1P23415 457 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 VAMP1P23763 118 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 DUSP1P28562 367 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 SUMF2Q8NBJ7 301 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 CLDND2Q8NHS1 167 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 GRPEL2Q8TAA5 225 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 HES4Q9HCC6 221 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 CHMP1AQ9HD42 196 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-209ENST00000627282 MALRD1Q5VYJ5 2156 aa15.9■□□□□ 0.14
CNOT9-209ENST00000627282 A0A0B4J2A0 478 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 SNAPC5O75971 98 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 PGAM2P15259 253 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 LGALSLQ3ZCW2 172 aaPredicted RBP15.89■□□□□ 0.13
CNOT9-209ENST00000627282 TMEM155Q4W5P6 130 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 Q6P435 159 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 RIMS4Q9H426 269 aaPredicted RBP15.89■□□□□ 0.13
CNOT9-209ENST00000627282 Q9N2K0 584 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 SHPKQ9UHJ6 478 aa15.89■□□□□ 0.13
CNOT9-209ENST00000627282 C14orf166Q9Y224 244 aaKnown RBP15.89■□□□□ 0.13
CNOT9-209ENST00000627282 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.89■□□□□ 0.132e-7■■■■■ 34.2
CNOT9-209ENST00000627282 TRBV6-6A0A0A6YYG2 114 aa15.88■□□□□ 0.13
CNOT9-209ENST00000627282 TRAV24A0A0B4J272 114 aa15.88■□□□□ 0.13
CNOT9-209ENST00000627282 TNFRSF13BO14836 293 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms