RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ISG15P05161 165 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CDK1P06493 297 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SLC35G6P0C7Q6 338 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 C8orf88P0DMB2 117 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CXCR1P25024 350 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 PSMA1P25786 263 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 IL3RAP26951 378 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 IFNGR2P38484 337 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CBX5P45973 191 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 HSPA13P48723 471 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 RAP1GDS1P52306 607 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 AP2S1P53680 142 aaPredicted RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 TCL1AP56279 114 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 MTPNP58546 118 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ARPC4P59998 168 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ARF6P62330 175 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 RANP62826 216 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 DYNLL1P63167 89 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CCL7P80098 99 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 PPP1R1AQ13522 171 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 TMED2Q15363 201 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ZNF141Q15928 474 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 HLA-DRB5Q30154 266 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SYT6Q5T7P8 510 aaPredicted RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 HACD4Q5VWC8 232 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SYPL2Q5VXT5 272 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CST9Q5W186 159 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CD200R1LQ6Q8B3 271 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CCDC121Q6ZUS5 278 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CPNE9Q8IYJ1 553 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 OR51Q1Q8NH59 317 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 FAM45AQ8TCE6 357 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ZFAND1Q8TCF1 268 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CASTOR1Q8WTX7 329 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 C22orf15Q8WYQ4 148 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 AP3S1Q92572 193 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 RAB8BQ92930 207 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 PPWD1Q96BP3 646 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 TLCD1Q96CP7 247 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SNF8Q96H20 258 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 FAM19A4Q96LR4 140 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 RDH12Q96NR8 316 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 FBXL15Q9H469 300 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 MAP1LC3AQ9H492 121 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SLC2A9Q9NRM0 540 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SPANXB1Q9NS25 103 aaPredicted RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 NDRG2Q9UN36 371 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ORC6Q9Y5N6 252 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ANKRD30AQ9BXX3 1397 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 ADGRL3Q9HAR2 1447 aa1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 NUP153P49790 1475 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 CHD2O14647 1828 aaKnown RBP1.8□□□□□ -2.12
SCAMP1-205ENST00000614488 SORL1Q92673 2214 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 LOC102724200A0A096LPH7 203 aaPredicted RBP1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 LOC105371267A0A1B0GV96 52 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 TMEM72A0PK05 275 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 RBFOX3A6NFN3 312 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 METTL15A6NJ78 407 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 C3orf84H3BNL1 204 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 H3BQV1 296 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 KCNK1O00180 336 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 UBDO15205 165 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 ACOX3O15254 700 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 DENRO43583 198 aaKnown RBP1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 SYNGR1O43759 233 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 CCDC22O60826 627 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 UPK1BO75841 260 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 CIAO1O76071 339 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 PTHP01270 115 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 IFNA16P05015 189 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 IL6P05231 212 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 OR4E1P0C645 316 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 TSPOP30536 169 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 SMAGPQ0VAQ4 97 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 SRSF6Q13247 344 aaKnown RBP1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 GUK1Q16774 197 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 CEACAM16Q2WEN9 425 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 TMEM176BQ3YBM2 270 aaPredicted RBP1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 HHATQ5VTY9 493 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 KDM4DQ6B0I6 523 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 LRRN1Q6UXK5 716 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 FA2HQ7L5A8 372 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 TEX47Q8TBZ9 253 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 BLNKQ8WV28 456 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 NELFBQ8WX92 580 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 SMARCD1Q96GM5 515 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 CEP19Q96LK0 163 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 IGF2BP2-AS1Q96M15 143 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 METTL26Q96S19 204 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 EBNA1BP2Q99848 306 aaKnown RBP1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 TBL1XR1Q9BZK7 514 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 MS4A6AQ9H2W1 248 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 RHOFQ9HBH0 211 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 C12orf4Q9NQ89 552 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 HEBP1Q9NRV9 189 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 CA10Q9NS85 328 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 GID8Q9NWU2 228 aa1.79□□□□□ -2.12
SCAMP1-205ENST00000614488 DNAJC27Q9NZQ0 273 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms