RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ZNF260Q3ZCT1 412 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 LY6G6FQ5SQ64 297 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 MINOS1Q5TGZ0 78 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 HCP5Q6MZN7 132 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 RBMS3Q6XE24 437 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 ZNF782Q6ZMW2 699 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 Q6ZS49 121 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 ABHD12Q8N2K0 398 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 BEND2Q8NDZ0 799 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 GALMQ96C23 342 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 ZNF69Q9UC07 566 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 MINOS1-NBL1R4GNA1 71 aa13.51□□□□□ -0.25
SHKBP1-219ENST00000599575 ANK3Q12955 4377 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 A0A075B6Q4 140 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 ODF3BA8MYP8 253 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 MNDAP41218 407 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 RIPPLY3P57055 190 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 HMGN3Q15651 99 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 PRAMEF5Q5TYX0 476 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 PNKDQ8N490 385 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 OR9G1Q8NH87 305 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 C15orf40Q8WUR7 153 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 Q9N2K0 584 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 RABL2AQ9UBK7 228 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 JPT1Q9UK76 154 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 RABL2BQ9UNT1 228 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 FAM96BQ9Y3D0 163 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 A3GALT2U3KPV4 340 aa13.5□□□□□ -0.25
SHKBP1-219ENST00000599575 TRAV18A0A075B6X5 111 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 MEX3AA1L020 520 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 TOR1AO14656 332 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 RGS11O94810 467 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 IGLV1-47P01700 117 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 HBZP02008 142 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 FBP1P09467 338 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 OMGP23515 440 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 SAA4P35542 130 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 GNG2P59768 71 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 AANATQ16613 207 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 TMEM69Q5SWH9 247 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 BRD3OSQ6XYD6 125 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 RFESDQ8TAC1 157 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 MALSU1Q96EH3 234 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 AUNIPQ9H7T9 357 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
SHKBP1-219ENST00000599575 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 MEIOCA2RUB1 952 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 TRDCB7Z8K6 153 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 SDCBPO00560 298 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 MMP23AO75900 390 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 FCGR3AP08637 254 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 COX7A1P24310 79 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 NFYBP25208 207 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 CEACAM3P40198 252 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 CBX5P45973 191 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 LOXL3P58215 753 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 KLRD1Q13241 179 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 OR4A4PQ8NGN8 299 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 GHITMQ9H3K2 345 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 ZMAT3Q9HA38 289 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 GNG12Q9UBI6 72 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 DSCAML1Q8TD84 2053 aa13.48□□□□□ -0.25
SHKBP1-219ENST00000599575 IGHV3OR16-10A0A075B7F0 116 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 TMEM235A6NFC5 223 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 OOSP1A8MZH6 123 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 TCF21O43680 179 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 YPEL1O60688 119 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 ARG1P05089 322 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 HTR1DP28221 377 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 HILS1P60008 231 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 OLFML2AQ68BL7 652 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 LDLRAD3Q86YD5 345 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 LINC00311Q8N616 119 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 TMEM86BQ8N661 226 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 SETD6Q8TBK2 473 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 FAM216AQ8WUB2 273 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 YPEL2Q96QA6 119 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 NXF2Q9GZY0 626 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 OR2S2Q9NQN1 319 aa13.47□□□□□ -0.25
SHKBP1-219ENST00000599575 LEUTXA8MZ59 168 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 CLDN34H7C241 214 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 J3QR06 171 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 ITGB1BP1O14713 200 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 HPGDSO60760 199 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 EIF4EP06730 217 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 CTXN2P0C2S0 81 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 ELK1P19419 428 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 ZBTB25P24278 435 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 GDNFP39905 211 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 ARHGDIBP52566 201 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 HLA-DRB5Q30154 266 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 RUSC1-AS1Q66K80 236 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 BAIAP2L2Q6UXY1 529 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms