RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 PBOV1Q9GZY1 135 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 AUNIPQ9H7T9 357 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 ZNF556Q9HAH1 456 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 NEK6Q9HC98 313 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 GPR84Q9NQS5 396 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 INPP5EQ9NRR6 644 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 ZFP57Q9NU63 452 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 ARMC1Q9NVT9 282 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 RDH8Q9NYR8 311 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 DPM3Q9P2X0 92 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 SAMHD1Q9Y3Z3 626 aaKnown RBP4.43□□□□□ -1.7
DNMT1-220ENST00000589351 LSM4Q9Y4Z0 139 aaKnown RBP4.43□□□□□ -1.7
DNMT1-220ENST00000589351 LINC00312Q9Y6C7 94 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 U3KQK5 164 aa4.43□□□□□ -1.7
DNMT1-220ENST00000589351 IGHV2-26A0A0B4J1V2 119 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 A0A1W2PPQ1 181 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 PSMB11A5LHX3 300 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 DHRS7CA6NNS2 312 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 LOC110117498-PIK3R3F6TDL0 507 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 ARPC2O15144 300 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 SPRY2O43597 315 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 OR2F2O95006 317 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 FAM106CPP0CH98 169 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 ALOX5APP20292 161 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 GCSHP23434 173 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 GABRR1P24046 479 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 HOXD3P31249 432 aaPredicted RBP4.42□□□□□ -1.7
DNMT1-220ENST00000589351 MYCNOSP40205 109 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 CEBPDP49716 269 aaPredicted RBP4.42□□□□□ -1.7
DNMT1-220ENST00000589351 DLX6P56179 175 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 B2MP61769 119 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 KPNB1Q14974 876 aaKnown RBP4.42□□□□□ -1.7
DNMT1-220ENST00000589351 ZSCAN26Q16670 478 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 OR2T5Q6IEZ7 315 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 NOXA1Q86UR1 476 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 Q8IYB0 196 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 PGAM4Q8N0Y7 254 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 ABHD12Q8N2K0 398 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 CCDC54Q8NEL0 328 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 OR10G2Q8NGC3 310 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 OR2T29Q8NH02 315 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 GIPC3Q8TF64 312 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 CHPT1Q8WUD6 406 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 ZNF488Q96MN9 340 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 OR8B4Q96RC9 309 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 ATG101Q9BSB4 218 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 OSBPL10Q9BXB5 764 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 TMEM133Q9H2Q1 129 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 GAL3ST2Q9H3Q3 398 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 MAGIXQ9H6Y5 334 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 MOB1AQ9H8S9 216 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 PLEKHA1Q9HB21 404 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 SEBOXQ9HB31 216 aaPredicted RBP4.42□□□□□ -1.7
DNMT1-220ENST00000589351 RAB9BQ9NP90 201 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 VNN3Q9NY84 501 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 NKX1-2Q9UD57 310 aaPredicted RBP4.42□□□□□ -1.7
DNMT1-220ENST00000589351 NUFIP1Q9UHK0 495 aaKnown RBP4.42□□□□□ -1.7
DNMT1-220ENST00000589351 IKZF2Q9UKS7 526 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 CEPT1Q9Y6K0 416 aa4.42□□□□□ -1.7
DNMT1-220ENST00000589351 NOTCH3Q9UM47 2321 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 NBEAL2Q6ZNJ1 2754 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 TRGV10A0A0A0MS01 117 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 PQLC2LA1A4F0 135 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 ARRDC5A6NEK1 342 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 OOSP1A8MZH6 123 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 ZNF701M0R085 212 aaPredicted RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 MGST3O14880 152 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 PRAF2O60831 178 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 GATBO75879 557 aaKnown RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 CST1P01037 141 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 HOXB6P17509 224 aaKnown RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 PRKACAP17612 351 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 MPZP25189 248 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 MAGEA2P43356 314 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 OR3A1P47881 315 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 THBS3P49746 956 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FUT6P51993 359 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 BDH1Q02338 343 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FOXI1Q12951 378 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 SLAQ13239 276 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 EDDM3AQ14507 147 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 GINS1Q14691 196 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 GRK1Q15835 563 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 DMRTC1Q5HYR2 192 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 SPANXN2Q5MJ10 180 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 BCL2L15Q5TBC7 163 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 TRPM8Q7Z2W7 1104 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 DHFR2Q86XF0 187 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FOXRED2Q8IWF2 684 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 LAX1Q8IWV1 398 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 DEFB107AQ8IZN7 70 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 ARHGAP24Q8N264 748 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 OSR2Q8N2R0 312 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 OR4D6Q8NGJ1 314 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 TRMT10AQ8TBZ6 339 aaKnown RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 MITD1Q8WV92 249 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FCGR1BQ92637 280 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 EMG1Q92979 244 aaKnown RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 BORCS8Q96FH0 119 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms