RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 BAIAP2L2Q6UXY1 529 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 AJUBAQ96IF1 538 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 CYYR1Q96J86 154 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 CITED1Q99966 193 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 SULT4A1Q9BR01 284 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 CHST6Q9GZX3 395 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 PPA2Q9H2U2 334 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 DPAGT1Q9H3H5 408 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 AUNIPQ9H7T9 357 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 MEIOCA2RUB1 952 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 TMEM235A6NFC5 223 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 MFNGO00587 321 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 PSPNO60542 156 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 ZNF737O75373 536 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 HLA-DQB1P01920 261 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 GLAP06280 429 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
RAB40B-203ENST00000570676 MNDAP41218 407 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 OR3A1P47881 315 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 RBM39Q14498 530 aaKnown RBP12.29□□□□□ -0.44
RAB40B-203ENST00000570676 ZNF273Q14593 569 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 GRK1Q15835 563 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 ZNF260Q3ZCT1 412 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 C17orf107Q6ZR85 190 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 Q6ZSV7 163 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 SNX29P2Q8IUI4 249 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 OR4S1Q8NGB4 309 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 PPP1R35Q8TAP8 253 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 SNX22Q96L94 193 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 SOSTQ9BQB4 213 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 KCNK7Q9Y2U2 307 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 V9GYH0 126 aa12.29□□□□□ -0.44
RAB40B-203ENST00000570676 SERPINE3A8MV23 424 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 K7N7A8 449 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 WIPF1O43516 503 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 TK1P04183 234 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 PTHLHP12272 177 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 ETV6P41212 452 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 PROK1P58294 105 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 RPL31P62899 125 aaKnown RBP12.28□□□□□ -0.44
RAB40B-203ENST00000570676 PITPNAQ00169 270 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 LSAMPQ13449 338 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 ATXN7L3Q14CW9 347 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-203ENST00000570676 PYHIN1Q6K0P9 492 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 OR8H2Q8N162 312 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 BEND2Q8NDZ0 799 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 S100ZQ8WXG8 99 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 ABHD1Q96SE0 405 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 FAM234AQ9H0X4 552 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
RAB40B-203ENST00000570676 ETAA1Q9NY74 926 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-203ENST00000570676 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 ELF5Q9UKW6 265 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-203ENST00000570676 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
RAB40B-203ENST00000570676 MGST3O14880 152 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 TPPPO94811 219 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 CD3GP09693 182 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 CCL3L1P16619 93 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 KCNJ3P48549 501 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 DLX6P56179 175 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 GNG2P59768 71 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.45
RAB40B-203ENST00000570676 ZNF45Q02386 682 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 PNLIPRP3Q17RR3 467 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 MIDNQ504T8 468 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 HACD4Q5VWC8 232 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 TMEM200BQ69YZ2 307 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 DHRS7BQ6IAN0 325 aaPredicted RBP12.27□□□□□ -0.45
RAB40B-203ENST00000570676 TREML4Q6UXN2 200 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 MFSD4AQ8N468 514 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 OR5R1Q8NH85 324 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 C15orf40Q8WUR7 153 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 TSC22D3Q99576 134 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 ING3Q9NXR8 418 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 RNF114Q9Y508 228 aa12.27□□□□□ -0.45
RAB40B-203ENST00000570676 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 CA11O75493 328 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 CSN2P05814 226 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 PTBP1P26599 531 aaKnown RBP eCLIP12.26□□□□□ -0.45
RAB40B-203ENST00000570676 PRSS3P35030 304 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 AESQ08117 197 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 EDDM3AQ14507 147 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 ZNF79Q15937 498 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 PYDC2Q56P42 97 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 GDPD3Q7L5L3 318 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 TCF23Q7RTU1 214 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 NUDCD2Q8WVJ2 157 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 CMSS1Q9BQ75 279 aaKnown RBP12.26□□□□□ -0.45
RAB40B-203ENST00000570676 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
RAB40B-203ENST00000570676 C16orf95Q9H693 158 aa12.26□□□□□ -0.45
RAB40B-203ENST00000570676 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms