RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CPAMD8Q8IZJ3 1885 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ZNF891A8MT65 544 aaPredicted RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 B4E171 279 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RPL36A-HNRNPH2H7BZ11 118 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 CBR3O75828 277 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 TUSC2O75896 110 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 PTBP3O95758 552 aaKnown RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 IGHV3-13P01766 116 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 IGHV3-7P01780 117 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 CCL2P13500 99 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 OR3A4PP47883 348 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 TDGF1P3P51864 188 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 TMEM50BP56557 158 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RAB4BP61018 213 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ZXDAP98168 799 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 UBE2V2Q15819 145 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 TAF9Q16594 264 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 HIKESHIQ53FT3 197 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 LBHQ53QV2 105 aaPredicted RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 AKR1C8PQ5T2L2 129 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 C17orf82Q86X59 251 aaPredicted RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 SUMF1Q8NBK3 374 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 OR51H1Q8NH63 302 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 OR51E1Q8TCB6 317 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RNF133Q8WVZ7 376 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RAB39BQ96DA2 213 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 LPAR2Q9HBW0 351 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 WFDC1Q9HC57 220 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 MSL2Q9HCI7 577 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.55□□□□□ -1.68
PROM1-220ENST00000540805 FAM206AQ9NX38 181 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 MRPS18CQ9Y3D5 142 aaKnown RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 SPTBN4Q9H254 2564 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 A0A087WWC5 75 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 A0A1W2PR77 199 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 LRRC30A6NM36 301 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 H3BQ15 152 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 NKX2-8O15522 239 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 GALR2O43603 387 aaPredicted RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 WDR1O75083 606 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 DXOO77932 396 aaKnown RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 HLA-HP01893 362 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 CRYABP02511 175 aaKnown RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 FMODQ06828 376 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 EIF3IQ13347 325 aaKnown RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 ELOBQ15370 118 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 PCK2Q16822 640 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 THEM4Q5T1C6 240 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 PLXDC2Q6UX71 529 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 OR13D1Q8NGV5 346 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 CCL17Q92583 94 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ZDHHC16Q969W1 377 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 SLAMF6Q96DU3 332 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 SH3BGRL3Q9H299 93 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 CHST11Q9NPF2 352 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 A0A1W2PP11 408 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 K7N7A8 449 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 M0QZ24 198 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 M0R135 149 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 SIRPB1O00241 398 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 PLPP3O14495 311 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 XRCC2O43543 280 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 CTSDP07339 412 aaPredicted RBP4.54□□□□□ -1.68
PROM1-220ENST00000540805 LMO1P25800 156 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 APOBEC1P41238 236 aaKnown RBP4.54□□□□□ -1.68
PROM1-220ENST00000540805 PHLDA2Q53GA4 152 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 ZNF880Q6PDB4 577 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 RNF144BQ7Z419 303 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 FAM185AQ8N0U4 392 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 OR1L6Q8NGR2 347 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 M1APQ8TC57 530 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 ZNF799Q96GE5 643 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 TECTBQ96PL2 329 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 RBFOX3A6NFN3 312 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 PRR33A8MZF0 331 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 GDF9O60383 454 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 VAMP5O95183 116 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 GOSR1O95249 250 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 CLPSP04118 112 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 CLEC3BP05452 202 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 CD55P08174 381 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 DEFA4P12838 97 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 MEOX1P50221 254 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 DLK1P80370 383 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 NHLH1Q02575 133 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 MZT1Q08AG7 82 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 OR5I1Q13606 314 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 IL11RAQ14626 422 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 ARL6IP1Q15041 203 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 WDR25Q64LD2 544 aaPredicted RBP4.54□□□□□ -1.68
PROM1-220ENST00000540805 ZNF705AQ6ZN79 300 aaPredicted RBP4.54□□□□□ -1.68
PROM1-220ENST00000540805 KMT5CQ86Y97 462 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 RFESDQ8TAC1 157 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 CT55Q8WUE5 264 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 C1orf147Q96MC9 270 aaPredicted RBP4.54□□□□□ -1.68
PROM1-220ENST00000540805 ZNF2Q9BSG1 426 aaPredicted RBP4.54□□□□□ -1.68
PROM1-220ENST00000540805 MYOTQ9UBF9 498 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 TCFL5Q9UL49 500 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 DOCK11Q5JSL3 2073 aa4.54□□□□□ -1.68
PROM1-220ENST00000540805 CBY3A6NI87 242 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms