RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 CDIPTO14735 213 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 DEGS1O15121 323 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 YIF1AO95070 293 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 APLNRP35414 380 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 MEOX1P50221 254 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 IDH3GP51553 393 aaPredicted RBP6.34□□□□□ -1.4
C11orf54-207ENST00000528288 RPS23P62266 143 aaKnown RBP6.34□□□□□ -1.4
C11orf54-207ENST00000528288 ARL16Q0P5N6 197 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 RNFT1Q5M7Z0 435 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 DCAF10Q5QP82 559 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF826PQ6ZT77 177 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 UBALD2Q8IYN6 164 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 OR5P3Q8WZ94 311 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 RAB39BQ96DA2 213 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 TMEM56Q96MV1 263 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 PRO3102Q9H379 93 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 ATP23Q9Y6H3 246 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 TMEM56-RWDD3S4R434 201 aa6.34□□□□□ -1.4
C11orf54-207ENST00000528288 LNP1A1A4G5 178 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 B4E171 279 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 LYZL6O75951 148 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 IL18BPO95998 194 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 IGHEP01854 428 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TAGLN2P37802 199 aaKnown RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TSPAN7P41732 249 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ELLP55199 621 aaPredicted RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 WDR86Q86TI4 376 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF808Q8N4W9 903 aaPredicted RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TPRX1Q8N7U7 411 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 PBDC1Q9BVG4 233 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 OR2J1Q9GZK6 312 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF391Q9UJN7 358 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 KIAA1324LA8MWY0 1029 aaPredicted RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 YKT6O15498 198 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 PITX3O75364 302 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 IGKV1-39P01597 117 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 MT-ND4LP03901 98 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 IGKV1D-39P04432 117 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 VDAC1P21796 283 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 F2RP25116 425 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 MPLP40238 635 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF295-AS1Q8N0V1 137 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TAAR9Q96RI9 348 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 B4GALT7Q9UBV7 327 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TRAPPC2LQ9UL33 140 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 STRAPQ9Y3F4 350 aaKnown RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 MGAQ8IWI9 3026 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 DMXL1Q9Y485 3027 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 CACNA1HO95180 2353 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 WNT9BO14905 357 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 UCP1P25874 307 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 UBE2KP61086 200 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 RPL23AP62750 156 aaKnown RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ID3Q02535 119 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 SRSF6Q13247 344 aaKnown RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 CLN3Q13286 438 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF266Q14584 549 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 LTC4SQ16873 150 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF324BQ6AW86 544 aaPredicted RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 OR8G2PQ6IF36 304 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 BEND4Q6ZU67 534 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 SSX7Q7RTT5 188 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 SLC25A31Q9H0C2 315 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TNRC6BQ9UPQ9 1833 aaKnown RBP6.33□□□□□ -1.4
C11orf54-207ENST00000528288 SPTBN2O15020 2390 aa6.33□□□□□ -1.4
C11orf54-207ENST00000528288 TRBV23-1A0A0A0MS06 115 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 C5orf52A6NGY3 159 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 LINC00587B1AMM8 73 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 AGFG2O95081 481 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 IGHV3-13P01766 116 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 IGHV3-7P01780 117 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 DEFA4P12838 97 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 SPANXN5Q5MJ07 72 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 TMEM45BQ96B21 275 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 SPIN2AQ99865 258 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 SPIN2BQ9BPZ2 258 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 STRADBQ9C0K7 418 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF665Q9H7R5 613 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 OR2W1Q9Y3N9 320 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 PCNX2A6NKB5 2137 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 IGKV3D-15A0A087WSY6 115 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 KIR2DS1A0A191URI9 304 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 CXCL1P09341 107 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 KIR2DS4P43632 304 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 RAB11AP62491 216 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 DLK1P80370 383 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 ICAM4Q14773 271 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 KIR2DS1Q14954 304 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 CLEC12BQ2HXU8 276 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 ZNF429Q86V71 674 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 OR5A2Q8NGI9 324 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 RNF122Q9H9V4 155 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 UFSP2Q9NUQ7 469 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 RNF115Q9Y4L5 304 aa6.32□□□□□ -1.4
C11orf54-207ENST00000528288 ROS1P08922 2347 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms