RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SMLR1H3BR10 107 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 TOR1AO14656 332 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 MYO1DO94832 1006 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 CDK14O94921 469 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 MPZL1O95297 269 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 SNAP29O95721 258 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 CDK1P06493 297 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 CD52P31358 61 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 KDELR2P33947 212 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR10A3P58181 314 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF816Q0VGE8 651 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 RAB31Q13636 194 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 EBI3Q14213 229 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ABCA11PQ4W5N1 156 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 TMEM31Q5JXX7 168 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 CLEC12AQ5QGZ9 265 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 RBM48Q5RL73 367 aaKnown RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 FAM222AQ5U5X8 452 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 KCTD16Q68DU8 428 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 FAM231DQ6ZW35 169 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 CRLF3Q8IUI8 442 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF101Q8IZC7 436 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ACBD4Q8NC06 268 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF420Q8TAQ5 688 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 MARVELD1Q9BSK0 173 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 ASB7Q9H672 318 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 PARP11Q9NR21 331 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 KLF13Q9Y2Y9 288 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 PTPRZ1P23471 2315 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 PDCD11Q14690 1871 aaKnown RBP3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 IGKV1-6A0A0C4DH72 117 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 LOC389332A0A1B0GUA5 103 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 C7orf66A4D0T2 115 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF850A8MQ14 1090 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 F8VZ95 297 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 FABP7O15540 132 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR2A4O95047 310 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 IGKV1-39P01597 117 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 IGKV1D-39P04432 117 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 PSMB6P28072 239 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 GCLMP48507 274 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 ACOT2P49753 483 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 BAXQ07812 192 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 TMEM249Q2WGJ8 235 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF404Q494X3 552 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 COX19Q49B96 90 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 ACTBL2Q562R1 376 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR10J3Q5JRS4 329 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 CLLU1OSQ5K130 101 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 MORN3Q6PF18 240 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 SHISA6Q6ZSJ9 500 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 PRNTQ86SH4 94 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 PDPNQ86YL7 162 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 CCDC127Q96BQ5 260 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 BIRC8Q96P09 236 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 GPR82Q96P67 336 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR2A7Q96R45 310 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 PITX2Q99697 317 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 SPIN2AQ99865 258 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 SPIN2BQ9BPZ2 258 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF251Q9BRH9 671 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 SRRQ9GZT4 340 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZSCAN16Q9H4T2 348 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 C15orf41Q9Y2V0 281 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 MIA3Q5JRA6 1907 aa3.2□□□□□ -1.9
HMGB1P3-201ENST00000502802 TMEM213A2RRL7 107 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 M0QZ92 97 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 IL4P05112 153 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 SNRPAP09012 282 aaKnown RBP3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 RD3LP0DJH9 198 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 SKP1P63208 163 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 TPM4P67936 248 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 ELF3P78545 371 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 BNIP2Q12982 314 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 LINC00303Q3SY05 128 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 Q499Y3 187 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 KLHL12Q53G59 568 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 UNQ9165/PRO28630Q6UXU0 137 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 BOD1L2Q8IYS8 172 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 SPANXA2-OT1Q8N9U9 137 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 SLC26A10Q8NG04 563 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 FAM57AQ8TBR7 257 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 FMC1Q96HJ9 113 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 HBEGFQ99075 208 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 LLPHQ9BRT6 129 aaKnown RBP3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 TSGA10Q9BZW7 698 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 LHX5Q9H2C1 402 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 EURLQ9NYK6 297 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 IL20Q9NYY1 176 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 GINS2Q9Y248 185 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 NOSIPQ9Y314 301 aaKnown RBP3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 COL1A2P08123 1366 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 NID2Q14112 1375 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF638Q14966 1978 aaKnown RBP3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 DENND4CQ5VZ89 1909 aa3.19□□□□□ -1.9
HMGB1P3-201ENST00000502802 ATRXP46100 2492 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 ATG2BQ96BY7 2078 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms