RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 RFPL4AA6NLU0 287 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 FAM25EA8MYX2 175 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 B9A039 149 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 RFPL4AL1F8VTS6 287 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 GPR31O00270 319 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 MGST3O14880 152 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 SPINT2O43291 252 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 IGHV1-46P01743 117 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 AADACP22760 399 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 IL2RGP31785 369 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 NUP62P37198 522 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-214ENST00000495485 LUMP51884 338 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-214ENST00000495485 RND3P61587 244 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 BAMBIQ13145 260 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 SLC9A3R2Q15599 337 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 ADIPOQQ15848 244 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF826PQ6ZT77 177 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 MOGAT3Q86VF5 341 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 LGI3Q8N145 548 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF561Q8N587 486 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 RTN4IP1Q8WWV3 396 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-214ENST00000495485 GALNT14Q96FL9 552 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 PLPPR2Q96GM1 343 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 AKR1E2Q96JD6 320 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 TMEM246Q9BRR3 403 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 NMES1Q9C002 83 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 SLC5A7Q9GZV3 580 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 NAA60Q9H7X0 242 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 DYNLRB1Q9NP97 96 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 USF3Q68DE3 2245 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 AKAP9Q99996 3911 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 PDZD2O15018 2839 aa8.62□□□□□ -1.03
HDAC3-214ENST00000495485 ITPR3Q14573 2671 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 IGHV3-64DA0A0J9YX35 117 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 NKX6-3A6NJ46 265 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 DBX1A6NMT0 343 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 RNF212BA8MTL3 300 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 L7N2F9 121 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 LHBP01229 141 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 CD8AP01732 235 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 RLN2P04090 185 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 SCTP09683 121 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 GABRA2P47869 451 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 COL10A1Q03692 680 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 ATXN7L3Q14CW9 347 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-214ENST00000495485 HMGN3Q15651 99 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 ESCO2Q56NI9 601 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 IGSF11Q5DX21 431 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 KRBOX4Q5JUW0 171 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 SECTM1Q8WVN6 248 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 TMEM230Q96A57 120 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 OR2W1Q9Y3N9 320 aa8.61□□□□□ -1.03
HDAC3-214ENST00000495485 TRAV38-1A0A0B4J264 116 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 A0A0D9SG52 128 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 DUXBA0A1W2PPF3 345 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 WNT9BO14905 357 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 RGS13O14921 159 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 TUSC2O75896 110 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 PSG2P11465 335 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 SLC25A4P12235 298 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 PI3P19957 117 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 LOXP28300 417 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-214ENST00000495485 H2BFSP57053 126 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 EFNB3Q15768 340 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF672Q499Z4 452 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-214ENST00000495485 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-214ENST00000495485 GCSAMQ8N6F7 178 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 BOLLQ8N9W6 283 aaKnown RBP8.6□□□□□ -1.03
HDAC3-214ENST00000495485 OR10V1Q8NGI7 309 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 IL1F10Q8WWZ1 152 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 C2orf50Q96LR7 162 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 SPIN2AQ99865 258 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 SPIN2BQ9BPZ2 258 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 FXYD6Q9H0Q3 95 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 FAM234AQ9H0X4 552 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF665Q9H7R5 613 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 PLEKHF2Q9H8W4 249 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 SAP30LQ9HAJ7 183 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 GCM1Q9NP62 436 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 PIPOXQ9P0Z9 390 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-214ENST00000495485 CSMD1Q96PZ7 3565 aa8.6□□□□□ -1.03
HDAC3-214ENST00000495485 FXYD6-FXYD2A0A087WZ82 144 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 C3orf85A0A1B0GTC6 90 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 SHISA9B4DS77 424 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms