RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PAX5Q02548 391 aa9.03□□□□□ -0.96
APTX-230ENST00000494649 SAMD12Q8N8I0 201 aa9.03□□□□□ -0.96
APTX-230ENST00000494649 OR52L2PQ8NGH6 319 aa9.03□□□□□ -0.96
APTX-230ENST00000494649 AJUBAQ96IF1 538 aa9.03□□□□□ -0.96
APTX-230ENST00000494649 PSG11Q9UQ72 335 aa9.03□□□□□ -0.96
APTX-230ENST00000494649 ODF3BA8MYP8 253 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 NPIPB11E5RHQ5 1161 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 RBP4P02753 201 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 MELTFP08582 738 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 FBP1P09467 338 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 CD24P25063 80 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 ARFRP1Q13795 201 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 DIAPH2-AS1Q14236 149 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 SLC9A3R2Q15599 337 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 LY6EQ16553 131 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 CDNFQ49AH0 187 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 ZNF626Q68DY1 528 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 USP43Q70EL4 1123 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 GAPTQ8N292 157 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 OR11H6Q8NGC7 330 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 OR4P4Q8NGL7 312 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 NUDCD2Q8WVJ2 157 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 PHF21AQ96BD5 680 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 MDFIQ99750 246 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 C12orf4Q9NQ89 552 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 OR2S2Q9NQN1 319 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 KCNIP1Q9NZI2 227 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 GNG12Q9UBI6 72 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 HSF4Q9ULV5 492 aa9.02□□□□□ -0.97
APTX-230ENST00000494649 MFNGO00587 321 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 TOR1AO14656 332 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 SLC31A2O15432 143 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 SPINT2O43291 252 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 NAPSAO96009 420 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 GLAP06280 429 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 CD3GP09693 182 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 PPP1CCP36873 323 aaKnown RBP9.01□□□□□ -0.97
APTX-230ENST00000494649 MRPS15P82914 257 aaKnown RBP9.01□□□□□ -0.97
APTX-230ENST00000494649 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 C6orf183Q5T699 404 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 OR52W1Q6IF63 320 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 Q6YL49 198 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 GCDHQ92947 438 aaPredicted RBP9.01□□□□□ -0.97
APTX-230ENST00000494649 CHIAQ9BZP6 476 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 MBNL3Q9NUK0 354 aaKnown RBP9.01□□□□□ -0.97
APTX-230ENST00000494649 SPATA2Q9UM82 520 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 TRAV18A0A075B6X5 111 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 H3BUI4 141 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 ORC5O43913 435 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 CA11O75493 328 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 EIF4EP06730 217 aaKnown RBP9.01□□□□□ -0.97
APTX-230ENST00000494649 SCTP09683 121 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 REG1BP48304 166 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 RORCP51449 518 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 LOXL3P58215 753 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 BPIFB3P59826 476 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 MIDNQ504T8 468 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 PTX4Q96A99 478 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 ISOC1Q96CN7 298 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 SSX3Q99909 188 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 NCOR1P1Q9H4R4 102 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 ABRACLQ9P1F3 81 aa9.01□□□□□ -0.97
APTX-230ENST00000494649 MEIS3P1A6NDR6 274 aa9□□□□□ -0.97
APTX-230ENST00000494649 H3BMQ9 156 aa9□□□□□ -0.97
APTX-230ENST00000494649 H3BUX3 64 aa9□□□□□ -0.97
APTX-230ENST00000494649 J3QR06 171 aa9□□□□□ -0.97
APTX-230ENST00000494649 HPGDSO60760 199 aa9□□□□□ -0.97
APTX-230ENST00000494649 HTR1DP28221 377 aa9□□□□□ -0.97
APTX-230ENST00000494649 RANBP1P43487 201 aa9□□□□□ -0.97
APTX-230ENST00000494649 ZNF134P52741 427 aa9□□□□□ -0.97
APTX-230ENST00000494649 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
APTX-230ENST00000494649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9□□□□□ -0.97
APTX-230ENST00000494649 OR9G1Q8NH87 305 aa9□□□□□ -0.97
APTX-230ENST00000494649 RAB2BQ8WUD1 216 aa9□□□□□ -0.97
APTX-230ENST00000494649 ST6GALNAC5Q9BVH7 336 aa9□□□□□ -0.97
APTX-230ENST00000494649 GFOD1Q9NXC2 390 aa9□□□□□ -0.97
APTX-230ENST00000494649 OR1A1Q9P1Q5 309 aa9□□□□□ -0.97
APTX-230ENST00000494649 SLC23A1Q9UHI7 598 aa9□□□□□ -0.97
APTX-230ENST00000494649 ETV7Q9Y603 341 aa9□□□□□ -0.97
APTX-230ENST00000494649 CEPT1Q9Y6K0 416 aa9□□□□□ -0.97
APTX-230ENST00000494649 IGKV1D-8A0A087WSZ0 117 aa9□□□□□ -0.97
APTX-230ENST00000494649 RNF212BA8MTL3 300 aa9□□□□□ -0.97
APTX-230ENST00000494649 NOL3O60936 208 aaKnown RBP9□□□□□ -0.97
APTX-230ENST00000494649 IGLV1-47P01700 117 aa9□□□□□ -0.97
APTX-230ENST00000494649 FCGR3AP08637 254 aa9□□□□□ -0.97
APTX-230ENST00000494649 IER3P46695 156 aa9□□□□□ -0.97
APTX-230ENST00000494649 HLA-DRB5Q30154 266 aa9□□□□□ -0.97
APTX-230ENST00000494649 CROCCP3Q8IVE0 287 aa9□□□□□ -0.97
APTX-230ENST00000494649 OR10X1Q8NGY0 326 aa9□□□□□ -0.97
APTX-230ENST00000494649 GALMQ96C23 342 aa9□□□□□ -0.97
APTX-230ENST00000494649 PARP12Q9H0J9 701 aaKnown RBP9□□□□□ -0.97
APTX-230ENST00000494649 LINC00574Q9H8X3 128 aa9□□□□□ -0.97
APTX-230ENST00000494649 Q9N2K0 584 aa9□□□□□ -0.97
APTX-230ENST00000494649 MRPS7Q9Y2R9 242 aaKnown RBP9□□□□□ -0.97
APTX-230ENST00000494649 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
APTX-230ENST00000494649 TALDO1P37837 337 aa8.99□□□□□ -0.97
APTX-230ENST00000494649 TMBIM6P55061 237 aa8.99□□□□□ -0.97
APTX-230ENST00000494649 HMGN3Q15651 99 aa8.99□□□□□ -0.97
APTX-230ENST00000494649 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms