RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, human

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNA1-204	ENST00000466923	STRAP	Q9Y3F4	350 aa	Known RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923		A0A096LNT2	108 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	METTL21EP	A6NDL7	271 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	NKX6-3	A6NJ46	265 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	TSPAN4	O14817	238 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	SIGLEC5	O15389	551 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	LY6G6D	O95868	133 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	CHRM2	P08172	466 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	PAX1	P15863	534 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	SLC25A16	P16260	332 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	CD33	P20138	364 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	FUT3	P21217	361 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	CFP	P27918	469 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	NUP62	P37198	522 aa	Predicted RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR3A1	P47881	315 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	DSCR9	P59020	149 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	GPR176	Q14439	515 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	IGSF11	Q5DX21	431 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	DCAF12L2	Q5VW00	463 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	PRSS57	Q6UWY2	283 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	ASCL4	Q6XD76	172 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	BRD3OS	Q6XYD6	125 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	KCTD9	Q7L273	389 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	GVQW1	Q8N7I0	195 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	SLC25A38	Q96DW6	304 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	COQ2	Q96H96	371 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	MED30	Q96HR3	178 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	DIRAS2	Q96HU8	199 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	AKIP1	Q9NQ31	210 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	RAB22A	Q9UL26	194 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	TRAPPC2L	Q9UL33	140 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	MEIOC	A2RUB1	952 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	TNFRSF13B	O14836	293 aa	Predicted RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	HEXA	P06865	529 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	MSMB	P08118	114 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	IGHV4-31	P0DP07	118 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	COX7A1	P24310	79 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	KLRD1	Q13241	179 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	RBM39	Q14498	530 aa	Known RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	C9orf152	Q5JTZ5	239 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	ELP2	Q6IA86	826 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	ZNF561	Q8N587	486 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR13A1	Q8NGR1	328 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	RAB39B	Q96DA2	213 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	S100A16	Q96FQ6	103 aa	Known RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	SLIRP	Q9GZT3	109 aa	Known RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	SEBOX	Q9HB31	216 aa	Predicted RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	TNFRSF19	Q9NS68	423 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	RASL12	Q9NYN1	266 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	AK3	Q9UIJ7	227 aa		4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.08	□□□□□ -1.76
KPNA1-204	ENST00000466923		B4DSR2	109 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	ZNF561-AS1	K7EIQ3	104 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	CSN2	P05814	226 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	CSF3	P09919	207 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	TMEM155	Q4W5P6	130 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	PLA1A	Q53H76	456 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	SPIN3	Q5JUX0	258 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	TMEM69	Q5SWH9	247 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	CLEC9A	Q6UXN8	241 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	SAXO1	Q8IYX7	474 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR10V1	Q8NGI7	309 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR10R2	Q8NGX6	335 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	TMEM186	Q96B77	213 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	SDSL	Q96GA7	329 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	DUX5	Q96PT3	197 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	EXTL2	Q9UBQ6	330 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	SPATA2	Q9UM82	520 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	RBMX2	Q9Y388	322 aa	Known RBP	4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	COL6A5	A8TX70	2615 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923		A0A0G2JMP0	313 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923		A0A0X1KG70	313 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	INAFM1	C9JVW0	142 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	LDLRAD4	O15165	306 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	NDUFA2	O43678	99 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	PDCD6	O75340	191 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	UBB	P0CG47	229 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	MNDA	P41218	407 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	MRPS15	P82914	257 aa	Known RBP	4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	LOXL1	Q08397	574 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	TRIM16L	Q309B1	348 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR52W1	Q6IF63	320 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	CNIH2	Q6PI25	160 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	ZNF565	Q8N9K5	539 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	LINC01356	Q8N9X3	169 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	MINDY2	Q8NBR6	621 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR4M2	Q8NGB6	313 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	OR56B1	Q8NGI3	324 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	RAB40A	Q8WXH6	277 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	ARL11	Q969Q4	196 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	CMSS1	Q9BQ75	279 aa	Known RBP	4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	PECR	Q9BY49	303 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	TMPRSS13	Q9BYE2	586 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	MIXL1	Q9H2W2	232 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	PLEKHA2	Q9HB19	425 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	KLK11	Q9UBX7	282 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	ADAM30	Q9UKF2	790 aa		4.07	□□□□□ -1.76
KPNA1-204	ENST00000466923	IGKV1D-8	A0A087WSZ0	117 aa		4.06	□□□□□ -1.76
KPNA1-204	ENST00000466923	ODAM	A1E959	279 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms