RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CACNA1CQ13936 2221 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM186AA6NE01 2351 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 RAI1Q7Z5J4 1906 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ESPL1Q14674 2120 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPEGQ15772 3267 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHD3Q12873 2000 aaKnown RBP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 IGKV1-27A0A075B6S5 117 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 A0A0A6YYD4 124 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 A0A1B0GUH1 482 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 LRP5LA4QPB2 252 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SERPINE3A8MV23 424 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ATP6V1G2-DDX39BF2Z307 99 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 MFNGO00587 321 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ARPC1BO15143 372 aaKnown RBP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SOCS1O15524 211 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPINT2O43291 252 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PDCD6O75340 191 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 NXPH2O95156 264 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TCRBP04435 133 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CSN2P05814 226 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF35P13682 527 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF44P15621 663 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TBPP20226 339 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 KITLGP21583 273 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PTAFRP25105 342 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 HLA-DMAP28067 261 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC6A1P30531 599 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHRNB4P30926 498 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 GLRXP35754 106 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 MPV17P39210 176 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR3A3P47888 321 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 FABP6P51161 128 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CCR6P51684 374 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 KLF3P57682 345 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 RAB25P57735 213 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TAS2R46P59540 309 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ARPC4P59998 168 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 FGF12P61328 243 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 BTG1P62324 171 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 QRFPP83859 136 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 IL24Q13007 206 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PSG7Q13046 419 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CBX3Q13185 183 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZMYND11Q15326 602 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CARTPTQ16568 116 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TAF9Q16594 264 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TATDN3Q17R31 274 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 MPV17LQ2QL34 196 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ALKBH6Q3KRA9 238 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PIGYQ3MUY2 71 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHRFAM7AQ494W8 412 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF876PQ49A33 203 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CDNFQ49AH0 187 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SCGB2B2Q4G0G5 96 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 AGAP6Q5VW22 663 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC35E4Q6ICL7 350 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 BTN2A1Q7KYR7 527 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 LINC00596Q86U02 117 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 BIVMQ86UB2 503 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM17Q86X19 198 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CALHM1Q8IU99 346 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 Q8IYB0 196 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 BPIFB2Q8N4F0 458 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPERTQ8NA61 448 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 DUSP18Q8NEJ0 188 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR8G5Q8NG78 346 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR10AD1Q8NGE0 317 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5H2Q8NGV7 314 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR13G1Q8NGZ3 307 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR56B4Q8NH76 319 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CA5BP1Q8WTZ4 195 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 GIMAP1Q8WWP7 306 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5P3Q8WZ94 311 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 AQP3Q92482 292 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 UPRTQ96BW1 309 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PPP1R14BQ96C90 147 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 SEH1LQ96EE3 360 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ARHGAP5-AS1Q96IT6 56 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ST6GAL2Q96JF0 529 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PRRT1Q99946 306 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 NEURL2Q9BR09 285 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 GINS4Q9BRT9 223 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PECRQ9BY49 303 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 CXXC4Q9H2H0 198 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF442Q9H7R0 627 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 GPN1Q9HCN4 374 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM100Q9NV29 134 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 PPP1R14DQ9NXH3 145 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 NPAP1Q9NZP6 1156 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 GLS2Q9UI32 602 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF107Q9UII5 783 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF221Q9UK13 617 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ST3GAL6Q9Y274 331 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 ALG5Q9Y673 324 aa3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 INTS1Q8N201 2190 aaKnown RBP3.16□□□□□ -1.9
HMGB3P20-201ENST00000417997 EP300Q09472 2414 aaPredicted RBP3.15□□□□□ -1.9
HMGB3P20-201ENST00000417997 FRYLO94915 3013 aa3.15□□□□□ -1.9
HMGB3P20-201ENST00000417997 CACNA1GO43497 2377 aa3.15□□□□□ -1.9
HMGB3P20-201ENST00000417997 MYO15AQ9UKN7 3530 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms