RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 LHX9Q9NQ69 397 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 C1QCP02747 245 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 ASAH2BP0C7U1 165 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 TUBD1Q9UJT1 453 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 GPR132Q9UNW8 380 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 GNG7O60262 68 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 SPINK14Q6IE38 97 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 TMEM252Q8N6L7 170 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 OR2M3Q8NG83 312 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 IL19Q9UHD0 177 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 RFLNBQ8N5W9 214 aa12.96□□□□□ -0.33
CHD4-201ENST00000357008 FLYWCH2Q96CP2 140 aaKnown RBP12.96□□□□□ -0.33
CHD4-201ENST00000357008 K7ERU9 68 aa12.96□□□□□ -0.34
CHD4-201ENST00000357008 SYNGR1O43759 233 aa12.96□□□□□ -0.34
CHD4-201ENST00000357008 AURKAIP1Q9NWT8 199 aaPredicted RBP12.96□□□□□ -0.34
CHD4-201ENST00000357008 LDLRAD3Q86YD5 345 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 PIPOXQ9P0Z9 390 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 TMEM210A6NLX4 147 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 K7EQS6 105 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 TMPRSS2O15393 492 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 GCGP01275 180 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 RUNX1Q01196 453 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 NFAM1Q8NET5 270 aaPredicted RBP12.95□□□□□ -0.34
CHD4-201ENST00000357008 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 SLC25A33Q9BSK2 321 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 DSPPQ9NZW4 1301 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 A0A0U1RQV5 110 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
CHD4-201ENST00000357008 TMEM52Q8NDY8 209 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 UCN2Q96RP3 112 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 MT-ND6P03923 174 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 TRGC2P03986 189 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 SPINK2P20155 84 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 SLC35E4Q6ICL7 350 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 DHRS13Q6UX07 377 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 SFTPA1Q8IWL2 248 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 EML2O95834 649 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
CHD4-201ENST00000357008 TXNDC17Q9BRA2 123 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 DTX4Q9Y2E6 619 aa12.95□□□□□ -0.34
CHD4-201ENST00000357008 CD1BP29016 333 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 AP5S1Q9NUS5 200 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 ZFC3H1O60293 1989 aaKnown RBP12.94□□□□□ -0.34
CHD4-201ENST00000357008 FCARP24071 287 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
CHD4-201ENST00000357008 CLN8Q9UBY8 286 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 TCF21O43680 179 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 CD40P25942 277 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 PEBP1P30086 187 aaKnown RBP12.94□□□□□ -0.34
CHD4-201ENST00000357008 BHLHA15Q7RTS1 189 aaPredicted RBP12.94□□□□□ -0.34
CHD4-201ENST00000357008 TGIF2LYQ8IUE0 185 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 GMPPAQ96IJ6 420 aaPredicted RBP12.94□□□□□ -0.34
CHD4-201ENST00000357008 ABHD14BQ96IU4 210 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 HARBI1Q96MB7 349 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 RNF7Q9UBF6 113 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 TRAV39A0A0B4J263 110 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHD4-201ENST00000357008 ZNF784Q8NCA9 323 aaPredicted RBP12.94□□□□□ -0.34
CHD4-201ENST00000357008 Q8WTZ3 238 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 LGALS7P47929 136 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 MOGAT3Q86VF5 341 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 OR8A1Q8NGG7 326 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 RAB1CQ92928 201 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 SLC25A38Q96DW6 304 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
CHD4-201ENST00000357008 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 HBZP02008 142 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 CCL3P10147 92 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 ROM1Q03395 351 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 EIF4EBP2Q13542 120 aaPredicted RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 AQP10Q96PS8 301 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 TCFL5Q9UL49 500 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 GCM2O75603 506 aaPredicted RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 C21orf62-AS1Q17RA5 79 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 ZNF788Q6ZQV5 615 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 MRPL37Q9BZE1 423 aaKnown RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 ZNF665Q9H7R5 613 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 NPVFQ9HCQ7 196 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 H0Y980 276 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 J3QR06 171 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 M0R296 226 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 FOXS1O43638 330 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 LIFP15018 202 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 ABHD3Q8WU67 409 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 TP53RKQ96S44 253 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 KLK10O43240 276 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 HIST1H1BP16401 226 aaKnown RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
CHD4-201ENST00000357008 FAM209BQ5JX69 171 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 C1orf100Q5SVJ3 147 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 FAM27BQ5VT28 67 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms