RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
CXCL12-201ENST00000343575 IL13RA1P78552 427 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CCL8P80075 99 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 TNFAIP6P98066 277 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-201ENST00000343575 PEA15Q15121 130 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 HMGN3Q15651 99 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 BRICD5Q6PL45 260 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CLEC18BQ6UXF7 455 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 MUC15Q8N387 334 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CLEC18CQ8NCF0 446 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CHMP1AQ9HD42 196 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-201ENST00000343575 GCM1Q9NP62 436 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 TREM1Q9NP99 234 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 A0A0B4J2A0 478 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 MEIS3P1A6NDR6 274 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 LHBP01229 141 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 EGR1P18146 543 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 MZT1Q08AG7 82 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 FAM189A2Q15884 450 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 RNF212Q495C1 297 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 SCGB2B2Q4G0G5 96 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 MEX3BQ6ZN04 569 aaKnown RBP12.35□□□□□ -0.43
CXCL12-201ENST00000343575 MOGAT3Q86VF5 341 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 CBLN2Q8IUK8 224 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 GCSAMQ8N6F7 178 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 NUDCD2Q8WVJ2 157 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 EMG1Q92979 244 aaKnown RBP12.35□□□□□ -0.43
CXCL12-201ENST00000343575 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 SULT4A1Q9BR01 284 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 SHPKQ9UHJ6 478 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 HSF4Q9ULV5 492 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
CXCL12-201ENST00000343575 LRRK2Q5S007 2527 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 LRBAP50851 2863 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM221AA4D161 298 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 CRYBA1P05813 215 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 GSTP1P09211 210 aaKnown RBP12.34□□□□□ -0.43
CXCL12-201ENST00000343575 DANCRP0C864 163 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 SPP1P10451 314 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 Q6P435 159 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 LRRC29Q8WV35 223 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAAP24Q9BTP7 215 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 EGLN1Q9GZT9 426 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 DCAF16Q9NXF7 216 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 RAI1Q7Z5J4 1906 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A10PA6NDY2 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A18PA6NE21 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A16PA6NEW6 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A8PA6NJQ4 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A7PA6NKC0 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 DBX1A6NMT0 343 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 A6NNC1 897 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A22PA8MWA6 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A23PA8MXZ1 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 SRRM5B3KS81 715 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 TAAR5O14804 337 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 SIGLEC5O15389 551 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 OR7C1O76099 320 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-201ENST00000343575 SOD3P08294 240 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 LYL1P12980 280 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 CAV2P51636 162 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 PPP1R1AQ13522 171 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 ZNF146Q15072 292 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 LRRC37A5PQ49AS3 106 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 C11orf71Q6IPW1 123 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 ACP7Q6ZNF0 438 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 Q8IYB0 196 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 LINC00469Q8N7U9 141 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 DIRC2Q96SL1 478 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
CXCL12-201ENST00000343575 DNAJB11Q9UBS4 358 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
CXCL12-201ENST00000343575 DYSFO75923 2080 aa12.33□□□□□ -0.43
CXCL12-201ENST00000343575 DCHS2Q6V1P9 2916 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 C1orf196B1AJZ1 125 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 HS3ST1O14792 307 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 PDCD6O75340 191 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 NXPH2O95156 264 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 CLDN1O95832 211 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 PET100P0DJ07 73 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 PLA2G2AP14555 144 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 IL13RA2Q14627 380 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 ATXN7L3Q14CW9 347 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-201ENST00000343575 Q6ZPA2 131 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 GVQW1Q8N7I0 195 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 Q8TCH9 128 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 RXFP4Q8TDU9 374 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms