RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 A0A0G2JMP0 313 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 A0A0X1KG70 313 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 MEIOCA2RUB1 952 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 TMEM235A6NFC5 223 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 C17orf98A8MV24 154 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 A8MV72 311 aaPredicted RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 RNASEK-C17orf49H0YIS7 233 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 TMEM127O75204 238 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 GLAP06280 429 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 LIPFP07098 398 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 HIST1H1DP16402 221 aaKnown RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 RCC1P18754 421 aaPredicted RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 PI3P19957 117 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 SSTR5P35346 364 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 GLP1RP43220 463 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 KCNJ3P48549 501 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 MEF2CQ06413 473 aaPredicted RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 DYNC1I2Q13409 638 aaKnown RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 LDLRAD2Q5SZI1 272 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 FAM120AOSQ5T036 256 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 PRAMEF5Q5TYX0 476 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 SLC35E4Q6ICL7 350 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 Q6ZTK2 550 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 GDPD3Q7L5L3 318 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 VMO1Q7Z5L0 202 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 CROCCP3Q8IVE0 287 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 PNKDQ8N490 385 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 KIR3DL3Q8N743 410 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 OR4M2Q8NGB6 313 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 OR56B1Q8NGI3 324 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 OR4K15Q8NH41 348 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 OR1L1Q8NH94 360 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 CCDC107Q8WV48 283 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 NUDCD2Q8WVJ2 157 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 C17orf50Q8WW18 174 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 MAFIPQ8WZ33 124 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 GCDHQ92947 438 aaPredicted RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 UPRTQ96BW1 309 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 WDFY2Q96P53 400 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 NEDD4LQ96PU5 975 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 DCUN1D5Q9BTE7 237 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 URM1Q9BTM9 101 aaKnown RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 LINC00574Q9H8X3 128 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 UNKLQ9H9P5 680 aaKnown RBP4.81□□□□□ -1.64
SSX3-201ENST00000298396 SPACA1Q9HBV2 294 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.81□□□□□ -1.64
SSX3-201ENST00000298396 SIRT7Q9NRC8 400 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 PLEKHJ1Q9NW61 149 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 TMEM160Q9NX00 188 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 ZNRD1Q9P1U0 126 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 ONECUT1Q9UBC0 465 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 COMMD3Q9UBI1 195 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 KPTNQ9Y664 436 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 TRAV18A0A075B6X5 111 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 MEIKINA0A087WXM9 373 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 IGKV1-6A0A0C4DH72 117 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 CENPVL3A0A0U1RRI6 287 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 A0A1W2PQ09 198 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 hADV38S2A0JD32 116 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 TMEM30CPA0ZSE6 113 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 FAM172BPA6NC97 362 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 CCDC160A6NGH7 325 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ODF3BA8MYP8 253 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 C12orf77C9JDV5 145 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 MCRIP1C9JLW8 97 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 NPIPB11E5RHQ5 1161 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 J3QLI3 93 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 M0R1W7 72 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 XRCC3O43542 346 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 CLPXO76031 633 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 TOX4O94842 621 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 HLA-DQB1P01920 261 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 APOA1P02647 267 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 RBP4P02753 201 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 MELTFP08582 738 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 FCGR3AP08637 254 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ZNF728P0DKX0 622 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 IGHV1-8P0DP01 117 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 OMGP23515 440 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 GATA3P23771 443 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 PRTN3P24158 256 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 LOXL3P58215 753 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 TAS2R20P59543 309 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 GNMTQ14749 295 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 HERPUD1Q15011 391 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 HMGN3Q15651 99 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 CDNFQ49AH0 187 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 METTL11BQ5VVY1 283 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 RUSC1-AS1Q66K80 236 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 FAHD2BQ6P2I3 314 aaPredicted RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 ZNF782Q6ZMW2 699 aaPredicted RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 C1orf122Q6ZSJ8 110 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 LURAP1LQ8IV03 231 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 PDZD9Q8IXQ8 264 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 BCL6BQ8N143 479 aaPredicted RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 RFESDQ8TAC1 157 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 PPP1R35Q8TAP8 253 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ACOT12Q8WYK0 555 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms