RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FGF9P31371 208 aaPredicted RBP10.66□□□□□ -0.7
PCF11-201ENST00000298281 KISS1Q15726 138 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 MRGPRX3Q96LB0 322 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 LRRC61Q9BV99 259 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 MMP25Q9NPA2 562 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 A0A1B0GUL6 1792 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 FAM186AA6NE01 2351 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 PSCAO43653 123 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 GALNSP34059 522 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 MCHR2Q969V1 340 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 RNF167Q9H6Y7 350 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 ZNF665Q9H7R5 613 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 TOPAZ1Q8N9V7 1692 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 PAGE4O60829 102 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 CD1AP06126 327 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 RBMY1A1P0DJD3 496 aaKnown RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 RBMY1CP0DJD4 496 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 COX19Q49B96 90 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 GNRHR2Q96P88 292 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 ISG20L2Q9H9L3 353 aaKnown RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 CLN8Q9UBY8 286 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 LBHQ53QV2 105 aaPredicted RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 TJP1Q07157 1748 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 IGHV3OR15-7A0A075B7D8 119 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 FAM106CPP0CH98 169 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 TMEM33P57088 247 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 GLDNQ6ZMI3 551 aaPredicted RBP10.65□□□□□ -0.7
PCF11-201ENST00000298281 ERASQ7Z444 233 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 FGF14Q92915 247 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 PIMREGQ9BSJ6 248 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 MMP26Q9NRE1 261 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 A0A0B4J2E0 115 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 A0A1B0GX12 115 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 GABRA1P14867 456 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 LY6EQ16553 131 aa10.65□□□□□ -0.7
PCF11-201ENST00000298281 C4AP0C0L4 1744 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 CFAP161Q6P656 301 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 APOBEC4Q8WW27 367 aaKnown RBP10.65□□□□□ -0.71
PCF11-201ENST00000298281 HARBI1Q96MB7 349 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 CCL19Q99731 98 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 R4GN57 208 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 TMEM56-RWDD3S4R434 201 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 SRSF10O75494 262 aaKnown RBP10.65□□□□□ -0.71
PCF11-201ENST00000298281 PRDX2P32119 198 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 SOX8P57073 446 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 Q7L0L9 218 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 C4orf45Q96LM5 186 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 AUNIPQ9H7T9 357 aa10.65□□□□□ -0.71
PCF11-201ENST00000298281 OR2W5A6NFC9 320 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 RAC3P60763 192 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 OR10G8Q8NGN5 311 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 F11RQ9Y624 299 aaKnown RBP10.64□□□□□ -0.71
PCF11-201ENST00000298281 MTCH2Q9Y6C9 303 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 HIST1H1DP16402 221 aaKnown RBP10.64□□□□□ -0.71
PCF11-201ENST00000298281 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 OR5AU1Q8NGC0 362 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 TRIOBPQ9H2D6 2365 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 PLPP2O43688 288 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 ETHE1O95571 254 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 EML2O95834 649 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 CD99P14209 185 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 RPS27P42677 84 aaKnown RBP10.64□□□□□ -0.71
PCF11-201ENST00000298281 MMDQ15546 238 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 ZBTB37Q5TC79 503 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 CCDC144NLQ6NUI1 221 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 SIGLEC7Q9Y286 467 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 SHISA8B8ZZ34 492 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 FAM157CP0CG43 387 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 IL13RA2Q14627 380 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 LDLRAD3Q86YD5 345 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 MPC1Q9Y5U8 109 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 LINC00862A6NCI5 91 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 NUDT16L1Q9BRJ7 211 aaKnown RBP10.64□□□□□ -0.71
PCF11-201ENST00000298281 CXCL16Q9H2A7 254 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 MYO5AQ9Y4I1 1855 aaKnown RBP10.64□□□□□ -0.71
PCF11-201ENST00000298281 PDCD6O75340 191 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 NDUFB6O95139 128 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 CD74P04233 296 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 SLC6A1P30531 599 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 SRD5A2P31213 254 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 TRIP6Q15654 476 aaKnown RBP10.64□□□□□ -0.71
PCF11-201ENST00000298281 KIR3DL3Q8N743 410 aa10.64□□□□□ -0.71
PCF11-201ENST00000298281 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 LINC00303Q3SY05 128 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 C12orf73Q69YU5 71 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 WSB1Q9Y6I7 421 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 C3orf85A0A1B0GTC6 90 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 AKR7A2O43488 359 aa10.63□□□□□ -0.71
PCF11-201ENST00000298281 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms