RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LRP5LA4QPB2 252 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 SH2D1BO14796 132 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 CRISP2P16562 243 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 PNRC1Q12796 327 aaPredicted RBP13.63□□□□□ -0.23
USP43-201ENST00000285199 GAB4Q2WGN9 574 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 FDX2Q6P4F2 183 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 SGMS2Q8NHU3 365 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 PPP1R35Q8TAP8 253 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
USP43-201ENST00000285199 GYPAP02724 150 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 CAMPP49913 170 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 STRADBQ9C0K7 418 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 SLC35D1Q9NTN3 355 aa13.63□□□□□ -0.23
USP43-201ENST00000285199 ZNF729A6NN14 1252 aaPredicted RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 MRPL54Q6P161 138 aaKnown RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 RBKSQ9H477 322 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 A0A0A6YYD4 124 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 ENSAO43768 121 aaKnown RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 TMEM11P17152 192 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 DSCR4P56555 118 aaPredicted RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 ZNF837Q96EG3 531 aaPredicted RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 C5orf52A6NGY3 159 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 OR5G3P0C626 314 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 NDUFB7P17568 137 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 EIF3IQ13347 325 aaKnown RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 PLPPR5Q32ZL2 321 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 OR5B3Q8NH48 314 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 OR2V1Q8NHB1 315 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 GALMQ96C23 342 aa13.62□□□□□ -0.23
USP43-201ENST00000285199 SCARF2Q96GP6 870 aaPredicted RBP13.62□□□□□ -0.23
USP43-201ENST00000285199 A0A0J9YW62 118 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 CDIPTO14735 213 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 IER3P46695 156 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 RTL8AQ9BWD3 113 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 SIRT7Q9NRC8 400 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 DUXBA0A1W2PPF3 345 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 SUPT4H1P63272 117 aaKnown RBP13.61□□□□□ -0.23
USP43-201ENST00000285199 PAX5Q02548 391 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 M0R1X1 148 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 LAMTOR5O43504 91 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 HOXC4P09017 264 aaPredicted RBP13.61□□□□□ -0.23
USP43-201ENST00000285199 TMEM187Q14656 261 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 KIAA1644Q3SXP7 199 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 PYY3Q5JQD4 70 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 Q6ZN92 141 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 LRFN3Q9BTN0 628 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 ABCA4P78363 2273 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 C5orf63A6NC05 138 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 WISP1O95388 367 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 OR10J4P0C629 311 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 LSM6P62312 80 aaKnown RBP13.61□□□□□ -0.23
USP43-201ENST00000285199 MRGPRGQ86SM5 289 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 OR4C12Q96R67 309 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 DDA1Q9BW61 102 aa13.61□□□□□ -0.23
USP43-201ENST00000285199 SHISA7A6NL88 538 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 TRAF3IP2O43734 574 aaPredicted RBP13.6□□□□□ -0.23
USP43-201ENST00000285199 ZNF253O75346 499 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 NDUFB4O95168 129 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 IGFBP3P17936 291 aaPredicted RBP13.6□□□□□ -0.23
USP43-201ENST00000285199 ARL3P36405 182 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 GNG3P63215 75 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 EXT1Q16394 746 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 CSRP2Q16527 193 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 AKIRIN1Q9H9L7 192 aaPredicted RBP13.6□□□□□ -0.23
USP43-201ENST00000285199 OCIAD1Q9NX40 245 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 IGHV1OR15-9A0A0B4J2B8 117 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 IGKV1-9A0A0C4DH69 117 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 CCL4P13236 92 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 PLGLAQ15195 96 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 RBMXL3Q8N7X1 1067 aaKnown RBP13.6□□□□□ -0.23
USP43-201ENST00000285199 ACY3Q96HD9 319 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 TMEM222Q9H0R3 208 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 WFDC1Q9HC57 220 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 MYOZ1Q9NP98 299 aaPredicted RBP13.6□□□□□ -0.23
USP43-201ENST00000285199 TCTAP57738 103 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 SPINK14Q6IE38 97 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 M1APQ8TC57 530 aa13.6□□□□□ -0.23
USP43-201ENST00000285199 RIMS4Q9H426 269 aaPredicted RBP13.6□□□□□ -0.23
USP43-201ENST00000285199 F8VVB4 439 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 F8VWA3 439 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST1H2BKO60814 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 CYB5R3P00387 301 aaPredicted RBP13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST1H2BJP06899 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 MELTFP08582 738 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 CXCL1P09341 107 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 FAM157CP0CG43 387 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HOXA5P20719 270 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST1H2BOP23527 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST1H2BBP33778 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST1H2BDP58876 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST1H2BCP62807 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST2H2BEQ16778 126 aa13.59□□□□□ -0.23
USP43-201ENST00000285199 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms