RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 FOXB1Q99853 325 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 IFT22Q9H7X7 185 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 CYTL1Q9NRR1 136 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 SLC39A9Q9NUM3 307 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 NOSIPQ9Y314 301 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 RNF222A6NCQ9 220 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF850A8MQ14 1090 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 CHRM2P08172 466 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 CST2P09228 141 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 GTF2F2P13984 249 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 EDN2P20800 178 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 MDH2P40926 338 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 CA7P43166 264 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 GSK3AP49840 483 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 HBG1P69891 147 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 HBG2P69892 147 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 MICBQ29980 383 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 AARDQ4LEZ3 155 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 THEM4Q5T1C6 240 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 LHFPL2Q6ZUX7 228 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 OR5T2Q8NGG2 359 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 OR13G1Q8NGZ3 307 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 KCNG3Q8TAE7 436 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 GMPPAQ96IJ6 420 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ATP5SQ99766 215 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 C1QTNF6Q9BXI9 259 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 REG4Q9BYZ8 158 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 C19orf12Q9NSK7 152 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 CD300LBA8K4G0 201 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 S100A8P05109 93 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 PTAFRP25105 342 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 CFHR2P36980 270 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 SCAND1P57086 179 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 PMPCAQ10713 525 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 FAPQ12884 760 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM30BQ3MIR4 351 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 IGSF11Q5DX21 431 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ASPHD1Q5U4P2 390 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 AGAP6Q5VW22 663 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 AWAT2Q6E213 333 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 CNIH2Q6PI25 160 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF695Q8IW36 515 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 DNPH1O43598 174 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 GSTZ1O43708 216 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 TK1P04183 234 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 SERPINE2P07093 398 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ACHEP22303 614 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF146Q15072 292 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 AKR1C8PQ5T2L2 129 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 KCNIP4Q6PIL6 250 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM182Q6ZP80 229 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 OVCH2Q7RTZ1 564 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 GJC3Q8NFK1 279 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 SEC22CQ9BRL7 303 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ULBP2Q9BZM5 246 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ATG5Q9H1Y0 275 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ETAA1Q9NY74 926 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 NUP50Q9UKX7 468 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 TRBV2A0A0J9YWF9 115 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 HSBP1L1C9JCN9 74 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 KITLGP21583 273 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 THBS4P35443 961 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 OR3A1P47881 315 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 KIAA0141Q14154 515 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ANKRD55Q3KP44 614 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 DOK3Q7L591 496 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 AKR1E2Q96JD6 320 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 UBQLN2Q9UHD9 624 aa4.6□□□□□ -1.67
TOPBP1-201ENST00000260810 ANKRD34BA5PLL1 514 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 DFFBO76075 338 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 IL2RAP01589 272 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 IGHV1-46P01743 117 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 CXCL2P19875 107 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 PRSS3P35030 304 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 NKX2-5P52952 324 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 RPS27AP62979 156 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 UBA52P62987 128 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 YIF1BQ5BJH7 314 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 NHLRC3Q5JS37 347 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 ELP2Q6IA86 826 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF767PQ75MW2 155 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 AAED1Q7RTV5 226 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 C6orf201Q7Z4U5 140 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 LFNGQ8NES3 379 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 MALSU1Q96EH3 234 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 CIB3Q96Q77 187 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 TCEAL7Q9BRU2 100 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 MSL2Q9HCI7 577 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 XKRY2A2RUG3 117 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 MCRIP1C9JLW8 97 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 H2AFB2P0C5Z0 115 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF16P17020 682 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 LMO4P61968 165 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 HBMQ6B0K9 141 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 APH1AQ96BI3 265 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 GAR1Q9NY12 217 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 KIAA1456Q9P272 454 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 C22orf46C9J442 243 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 SLC17A2O00624 439 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 DVL1O14640 695 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms