RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 GZMHP20718 246 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 CD34P28906 385 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 FCGR2CP31995 323 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 NPY4RP50391 375 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 LUMP51884 338 aaPredicted RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 P2RX3P56373 397 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 SRPXP78539 464 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 PAX5Q02548 391 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 TLE4Q04727 773 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 AESQ08117 197 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 CARTPTQ16568 116 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 SWI5Q1ZZU3 235 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 TMEM128Q5BJH2 165 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 ZNF626Q68DY1 528 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 STUMQ69YW2 141 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 DTX2Q86UW9 622 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 CADM3Q8N126 398 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 UXS1Q8NBZ7 420 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 DEFB108BQ8NET1 73 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 PLPPR1Q8TBJ4 325 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 FAM216AQ8WUB2 273 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 SECTM1Q8WVN6 248 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 ASB13Q8WXK3 278 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 H1FXQ92522 213 aaKnown RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 C14orf79Q96F83 325 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 LURAP1Q96LR2 239 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 BBC3Q96PG8 261 aaPredicted RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 CCL19Q99731 98 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 CABLES2Q9BTV7 478 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 PDCD10Q9BUL8 212 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 BEX2Q9BXY8 128 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 ALX4Q9H161 411 aaPredicted RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 BEX1Q9HBH7 125 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 TAF9BQ9HBM6 251 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 GNG12Q9UBI6 72 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 SLC25A10Q9UBX3 287 aaPredicted RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 HIVEP3Q5T1R4 2406 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 CADP27708 2225 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 IGKV1D-17A0A075B6S4 117 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 A0A0A6YYJ9 748 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 hCG_1809904A0A1W2PP81 198 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 A0A1W2PPE2 198 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 A0A1W2PR64 198 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 A0A1W2PRV1 198 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ODAMA1E959 279 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNF729A6NN14 1252 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 NPIPB11E5RHQ5 1161 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 K7N7A8 449 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 GPR31O00270 319 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 SIGLEC5O15389 551 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 PSPNO60542 156 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 B3GALNT1O75752 331 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 SLC22A5O76082 557 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 IFNA2P01563 188 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 IFNA21P01568 189 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 HEXAP06865 529 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 CTSDP07339 412 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNF735P0CB33 412 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 PET100P0DJ07 73 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 DAOP14920 347 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 IGFBP2P18065 325 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ERP29P30040 261 aaKnown RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 OR3A1P47881 315 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 MECP2P51608 486 aaKnown RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 UCP3P55916 312 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 MRPS11P82912 194 aaKnown RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 BAMBIQ13145 260 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 CATR1Q13166 79 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 HMGN3Q15651 99 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 TMEM95Q3KNT9 176 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZFP69Q49AA0 526 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ATPAF1Q5TC12 328 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNF880Q6PDB4 577 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNF788Q6ZQV5 615 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 LYG2Q86SG7 212 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 RTN4RL2Q86UN3 420 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 C12orf45Q8N5I9 185 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 CD177Q8N6Q3 437 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNRF1Q8ND25 227 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 OR8B3Q8NGG8 313 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 OR13C8Q8NGS7 320 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ANGPTL6Q8NI99 470 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 MRGPRDQ8TDS7 321 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNF431Q8TF32 576 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 CASTOR1Q8WTX7 329 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 CHAC2Q8WUX2 184 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 MOB3AQ96BX8 217 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 SDSLQ96GA7 329 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 OR8B2Q96RD0 313 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 TRAF4Q9BUZ4 470 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 SLC5A7Q9GZV3 580 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 FXYD6Q9H0Q3 95 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 NCOR1P1Q9H4R4 102 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 CHODLQ9H9P2 273 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 BARX1Q9HBU1 254 aaPredicted RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 MBNL3Q9NUK0 354 aaKnown RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 LIN7CQ9NUP9 197 aaKnown RBP5.18□□□□□ -1.58
LIG3-206ENST00000586058 COMMD9Q9P000 198 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 ZNF581Q9P0T4 197 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 MGAT4CQ9UBM8 478 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms