RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 HLA-DRB5Q30154 266 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 POM121L2Q96KW2 1035 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 ELOVL1Q9BW60 279 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 MYOFQ9NZM1 2061 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 MEX3AA1L020 520 aaKnown RBP16.93■□□□□ 0.3
SUDS3-204ENST00000543473 IGHV4-34P06331 123 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 CYC1P08574 325 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 APCDD1LQ8NCL9 501 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 ZPBPQ9BS86 351 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 A0A1B0GU03 582 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 NPIPB9F8W1W9 429 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 TGIF1Q15583 401 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 ZNF718Q3SXZ3 478 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 PGA4P0DJD7 388 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 PGA5P0DJD9 388 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 IL11RAQ14626 422 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 SFTPA2Q8IWL1 248 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 AURKAIP1Q9NWT8 199 aaPredicted RBP16.93■□□□□ 0.3
SUDS3-204ENST00000543473 IGLV1-36A0A0B4J1U3 117 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 LRRC30A6NM36 301 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 DEFB108AA8MXU0 73 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 FCGR3AP08637 254 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 CCL2P13500 99 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 COL19A1Q14993 1142 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 VN1R17PQ8TDU5 208 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 PILRAQ9UKJ1 303 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 TGIF2-C20orf24A0A0A6YYL0 155 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 CTXND1A0A1B0GTU2 59 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 LINC00587B1AMM8 73 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 HOXA6P31267 233 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
SUDS3-204ENST00000543473 TRA2AQ13595 282 aaKnown RBP eCLIP16.92■□□□□ 0.33e-7■■■■□ 23.2
SUDS3-204ENST00000543473 IGFBP7Q16270 282 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 STUMQ69YW2 141 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 CXorf67Q86X51 503 aaPredicted RBP16.92■□□□□ 0.3
SUDS3-204ENST00000543473 TREM2Q9NZC2 230 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 CSN1S1P47710 185 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 OR3A1P47881 315 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 MYOZ1Q9NP98 299 aaPredicted RBP16.92■□□□□ 0.3
SUDS3-204ENST00000543473 CNIH1O95406 144 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 ADH4P08319 380 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 TMEM11P17152 192 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 RARRES2Q99969 163 aa16.92■□□□□ 0.3
SUDS3-204ENST00000543473 DANCRP0C864 163 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 FHITP49789 147 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 RND3P61587 244 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 C9orf40Q8IXQ3 194 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 DTD1Q8TEA8 209 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 KLF13Q9Y2Y9 288 aaPredicted RBP16.91■□□□□ 0.3
SUDS3-204ENST00000543473 GOLT1BQ9Y3E0 138 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 TCL1AP56279 114 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 SERF2P84101 59 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 CXorf65A6NEN9 183 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 OR5B21A6NL26 309 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 GCGP01275 180 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 TIPARPQ7Z3E1 657 aaKnown RBP16.91■□□□□ 0.3
SUDS3-204ENST00000543473 ZNF665Q9H7R5 613 aa16.91■□□□□ 0.3
SUDS3-204ENST00000543473 A0A1B0GV90 55 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 RNF222A6NCQ9 220 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 MSGN1A6NI15 193 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 CAMPP49913 170 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 FA2HQ7L5A8 372 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 CARFQ8N187 725 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 OR10D3Q8NH80 312 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 ZNF552Q9H707 407 aaPredicted RBP16.9■□□□□ 0.3
SUDS3-204ENST00000543473 TUBD1Q9UJT1 453 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 M0R296 226 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 LINC00469Q8N7U9 141 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 HEXA-AS1Q9H8Q6 139 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 OR2W1Q9Y3N9 320 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 CRYAAP02489 173 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 RPS11P62280 158 aaKnown RBP eCLIP16.9■□□□□ 0.3
SUDS3-204ENST00000543473 ELOBQ15370 118 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 COX19Q49B96 90 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 RSG1Q9BU20 258 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 OR10X1Q8NGY0 326 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 OR1P1Q8NH06 330 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 DECR2Q9NUI1 292 aa16.9■□□□□ 0.3
SUDS3-204ENST00000543473 PDE6DO43924 150 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 MT-CO3P00414 261 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 RAC3P60763 192 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 FDX2Q6P4F2 183 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 OR1K1Q8NGR3 316 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 SGMS2Q8NHU3 365 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 P4HTMQ9NXG6 502 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 PSME4Q14997 1843 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 TRAV14DV4A0A0A6YYC5 116 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 CRYM-AS1A6NIL9 109 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 SH2D2AQ9NP31 389 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 FBP1P09467 338 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 SPINK2P20155 84 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 ZP4Q12836 540 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 POC1AQ8NBT0 407 aa16.89■□□□□ 0.29
SUDS3-204ENST00000543473 TCF21O43680 179 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 EFNB1P98172 346 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 RASL10BQ96S79 203 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 PPP1R14DQ9NXH3 145 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 SNURFLB1AK76 121 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 TRGC1P0CF51 173 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms