RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 HMSDA8MTL9 139 aa14.17□□□□□ -0.14
PCDHA3-201ENST00000522353 ASAH2BP0C7U1 165 aa14.17□□□□□ -0.14
PCDHA3-201ENST00000522353 ECSCRQ19T08 205 aa14.17□□□□□ -0.14
PCDHA3-201ENST00000522353 FAM219AQ8IW50 185 aa14.17□□□□□ -0.14
PCDHA3-201ENST00000522353 GAPTQ8N292 157 aa14.17□□□□□ -0.14
PCDHA3-201ENST00000522353 LOC102723971A0A1B0GUV8 181 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 K7N7A8 449 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 DAOP14920 347 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 AESQ08117 197 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 OR2V2Q96R30 315 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 EP300Q09472 2414 aaPredicted RBP14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 FBXL17Q9UF56 701 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 ADAMTSL1Q8N6G6 1762 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 QSER1Q2KHR3 1735 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 NUBP1P53384 320 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 ATP5J2P56134 94 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 GAMTQ14353 236 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 CEACAM21Q3KPI0 293 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 RIPPLY2Q5TAB7 128 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 DGAT2L7PQ6IED9 249 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 SCARF2Q96GP6 870 aaPredicted RBP14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 HLA-GP17693 338 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 RANP62826 216 aaKnown RBP14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 C8orf82Q6P1X6 216 aaPredicted RBP14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 SLC35B3Q9H1N7 401 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 CCL28Q9NRJ3 127 aa14.16□□□□□ -0.14
PCDHA3-201ENST00000522353 RAB29O14966 203 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 PTP4A3O75365 173 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 WISP3O95389 354 aaPredicted RBP14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 NTN1O95631 604 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 GAPDHP04406 335 aaKnown RBP14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 COL10A1Q03692 680 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 CDCP2Q5VXM1 449 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 TRAPPC1Q9Y5R8 145 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 ZP3P21754 424 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 AMTP48728 403 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 POLR2GP62487 172 aaKnown RBP eCLIP14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 CHRNA10Q9GZZ6 450 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 MMP24Q9Y5R2 645 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 CLDN14O95500 239 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 FAM106CPP0CH98 169 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 PIGYQ3MUY2 71 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 CCL13Q99616 98 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 GATCO43716 136 aaKnown RBP14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 ZNF737O75373 536 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 P2RY1P47900 373 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 KRTDAPP60985 99 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 PCOLCEQ15113 449 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 OR4D10Q8NGI6 311 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 CHODLQ9H9P2 273 aa14.15□□□□□ -0.14
PCDHA3-201ENST00000522353 MC5RP33032 325 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 ZNF273Q14593 569 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 CLRN3Q8NCR9 226 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 ZNF426Q9BUY5 554 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 PITPNC1Q9UKF7 332 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 ARG1P05089 322 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 RPS4XP62701 263 aaKnown RBP14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 RPL30P62888 115 aaKnown RBP14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 GCSAMQ8N6F7 178 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 STXBP6Q8NFX7 210 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 SPSB2Q99619 263 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 RABAC1Q9UI14 185 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 VSIG8P0DPA2 414 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 ITLN1Q8WWA0 313 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 CENPVL1A0A0U1RR11 272 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 MBPP02686 304 aaPredicted RBP14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 RBM11P57052 281 aaKnown RBP14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 SPCS3P61009 180 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 OR1L6Q8NGR2 347 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 PERPQ96FX8 193 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 ASCL3Q9NQ33 180 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 SPTBN2O15020 2390 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 CEP250Q9BV73 2442 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 LOC101059948A0A1B0GTJ6 334 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 ID1P41134 155 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 PTTG1IPP53801 180 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 LILRB1Q8NHL6 650 aaPredicted RBP14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 NPAS1Q99742 590 aa14.14□□□□□ -0.15
PCDHA3-201ENST00000522353 GYPAP02724 150 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 OR1K1Q8NGR3 316 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 SLC2A9Q9NRM0 540 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 NAT8BQ9UHF3 227 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 PRSS50Q9UI38 385 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 MMP7P09237 267 aaPredicted RBP14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 MOGAT2Q3SYC2 334 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 ADAT3Q96EY9 351 aaPredicted RBP14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 OR2T8A6NH00 312 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 TTRP02766 147 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 TMEM33P57088 247 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 CLEC18BQ6UXF7 455 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 ZNF66Q6ZN08 573 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 RBPMS2Q6ZRY4 209 aaKnown RBP14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 PGLYRP3Q96LB9 341 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 ABHD14AQ9BUJ0 271 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 KCNK15Q9H427 330 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 VSIG4Q9Y279 399 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 J3QR89 54 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 ADIPOR1Q96A54 375 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms