RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 EPOPA6NHQ4 379 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF732B4DXR9 585 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 CD55P08174 381 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 RBM11P57052 281 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF92Q03936 586 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 SLC10A1Q14973 349 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 IGKV1D-13A0A0B4J2D9 117 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 IGHV3-64DA0A0J9YX35 117 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 A0A1B0GU03 582 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 TRAPPC2LH3BP13 241 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 AMBPP02760 352 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 IGKV1-13P0DP09 117 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 CCL2P13500 99 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 PSMB3P49720 205 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 GPM6AP51674 278 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 MKXQ8IYA7 352 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 PSMF1Q92530 271 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF501Q96CX3 271 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF845Q96IR2 970 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 OR51I2Q9H344 312 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 RAB35Q15286 201 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 CEACAM16Q2WEN9 425 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 FIP1L1Q6UN15 594 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 CALHM1Q8IU99 346 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF816-ZNF321PA0A0X1KG74 233 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 CELA2AP08217 269 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 PSG2P11465 335 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF25P17030 456 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 CD81P60033 236 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 P2RY6Q15077 328 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 TMEM211Q6ICI0 200 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 MRPL21Q7Z2W9 205 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF664Q8N3J9 261 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 OR10J5Q8NHC4 309 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 KIR2DS1A0A191URI9 304 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 VAMP5O95183 116 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 TIAF1O95411 115 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 KIR2DS4P43632 304 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 CFHR1Q03591 330 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 SSC4DQ8WTU2 575 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 RCC1LQ96I51 464 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 PLA2G3Q9NZ20 509 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 SVILO95425 2214 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 SZT2Q5T011 3432 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 LOC102725191A0A1B0GVB3 256 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 TUSC2O75896 110 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 BCL3P20749 454 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 UCP3P55916 312 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 C10orf35Q96D05 121 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
TRAPPC9-208ENST00000520857 GZMBP10144 247 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 MAS1LP35410 378 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 JOSD1Q15040 202 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 KCNMB1Q16558 191 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 RSPO1Q2MKA7 263 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 OR56B2PQ8NGI1 322 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 SDSLQ96GA7 329 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 PATZ1Q9HBE1 687 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 GPR27Q9NS67 375 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 TRIOO75962 3097 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 A0A096LPE4 126 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 A0A1W2PPZ6 126 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 SLC22A20A6NK97 555 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 SYNGR2O43760 224 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 EN2P19622 333 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 SPCS3P61009 180 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 SHHQ15465 462 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 ELOVL1Q9BW60 279 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 DECR2Q9NUI1 292 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 IL36RNQ9UBH0 155 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 CXCL13O43927 109 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 PIAS2O75928 621 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 HNF1AP20823 631 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 PAX5Q02548 391 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 FOXO1Q12778 655 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 RHBDD2Q6NTF9 364 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 MRGPRGQ86SM5 289 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 RAB40CQ96S21 281 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 IL17BQ9UHF5 180 aa11.03□□□□□ -0.64
TRAPPC9-208ENST00000520857 IGHV1OR15-9A0A0B4J2B8 117 aa11.02□□□□□ -0.64
TRAPPC9-208ENST00000520857 ZNF320A2RRD8 509 aa11.02□□□□□ -0.64
TRAPPC9-208ENST00000520857 FAM3BP58499 235 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC9-208ENST00000520857 SRYQ05066 204 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms