RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SH3BGRL2Q9UJC5 107 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 SPTBN2O15020 2390 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 NPIPB11E5RHQ5 1161 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 F5H0A9 414 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-210ENST00000517713 KLF3P57682 345 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-210ENST00000517713 VHLLQ6RSH7 139 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 C22orf34Q6ZV56 151 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 COMMD7Q86VX2 200 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 FOXRED2Q8IWF2 684 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 LHFPL5Q8TAF8 219 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 TMEM222Q9H0R3 208 aa22.38■■□□□ 1.17
COL13A1-210ENST00000517713 CD200P41217 278 aa22.37■■□□□ 1.17
COL13A1-210ENST00000517713 SRPXP78539 464 aa22.37■■□□□ 1.17
COL13A1-210ENST00000517713 PRR7Q8TB68 274 aa22.37■■□□□ 1.17
COL13A1-210ENST00000517713 ELOVL5Q9NYP7 299 aa22.37■■□□□ 1.17
COL13A1-210ENST00000517713 DNAJB11Q9UBS4 358 aa22.37■■□□□ 1.17
COL13A1-210ENST00000517713 ATP6V1G2-DDX39BF2Z307 99 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 NMBP08949 121 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 MEX3BQ6ZN04 569 aaKnown RBP22.36■■□□□ 1.17
COL13A1-210ENST00000517713 CMTM1Q8IZ96 169 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 PRR18Q8N4B5 295 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 AQP10Q96PS8 301 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 OR1A1Q9P1Q5 309 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 ERRFI1Q9UJM3 462 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-210ENST00000517713 UBE2J1Q9Y385 318 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-210ENST00000517713 DMXL2Q8TDJ6 3036 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 MSGN1A6NI15 193 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 RRASP10301 218 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 SMIM21Q3B7S5 101 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 TMEM171Q8WVE6 324 aa22.36■■□□□ 1.17
COL13A1-210ENST00000517713 ZSCAN5BA6NJL1 495 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 PTBP3O95758 552 aaKnown RBP22.35■■□□□ 1.17
COL13A1-210ENST00000517713 CCKARP32238 428 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 UCNP55089 124 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 SMCO1Q147U7 214 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 LRRC29Q8WV35 223 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 TMED3Q9Y3Q3 217 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 TMEM30CPA0ZSE6 113 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 RPS23P62266 143 aaKnown RBP22.35■■□□□ 1.17
COL13A1-210ENST00000517713 HMGN3Q15651 99 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 TMEM268Q5VZI3 342 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 SLC35G3Q8N808 338 aa22.35■■□□□ 1.17
COL13A1-210ENST00000517713 C16orf97H3BN30 126 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 DEDDO75618 318 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 CD40P25942 277 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 SLC35E4Q6ICL7 350 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 PHYHIPLQ96FC7 376 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 TMEM56Q96MV1 263 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 USB1Q9BQ65 265 aaKnown RBP22.34■■□□□ 1.17
COL13A1-210ENST00000517713 TAF9BQ9HBM6 251 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 RAXQ9Y2V3 346 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 TMEM56-RWDD3S4R434 201 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 ACACAQ13085 2346 aa22.34■■□□□ 1.17
COL13A1-210ENST00000517713 IGLV3-9A0A075B6K5 115 aa22.33■■□□□ 1.17
COL13A1-210ENST00000517713 IFNL4K9M1U5 179 aa22.33■■□□□ 1.17
COL13A1-210ENST00000517713 SCGB1D2O95969 90 aa22.33■■□□□ 1.17
COL13A1-210ENST00000517713 OR10V1Q8NGI7 309 aa22.33■■□□□ 1.17
COL13A1-210ENST00000517713 GPHA2Q96T91 129 aa22.33■■□□□ 1.17
COL13A1-210ENST00000517713 LSM5Q9Y4Y9 91 aaKnown RBP22.33■■□□□ 1.17
COL13A1-210ENST00000517713 RELL2Q8NC24 303 aaPredicted RBP22.33■■□□□ 1.16
COL13A1-210ENST00000517713 BVESQ8NE79 360 aa22.33■■□□□ 1.16
COL13A1-210ENST00000517713 KCNIP1Q9NZI2 227 aa22.33■■□□□ 1.16
COL13A1-210ENST00000517713 CUL9Q8IWT3 2517 aa22.33■■□□□ 1.16
COL13A1-210ENST00000517713 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.32■■□□□ 1.16
COL13A1-210ENST00000517713 HSPA12AO43301 675 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 PGLYRP1O75594 196 aaPredicted RBP22.32■■□□□ 1.16
COL13A1-210ENST00000517713 TFF1P04155 84 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 S100GP29377 79 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 RBPJQ06330 500 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 ZNF695Q8IW36 515 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 OR10Z1Q8NGY1 313 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 CXorf58Q96LI9 332 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 SLC25A32Q9H2D1 315 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 JKAMPQ9P055 326 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 BSNQ9UPA5 3926 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 ATMQ13315 3056 aa22.32■■□□□ 1.16
COL13A1-210ENST00000517713 MBPP02686 304 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-210ENST00000517713 COL10A1Q03692 680 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 TESK1Q15569 626 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 PDZD9Q8IXQ8 264 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 STOML3Q8TAV4 291 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 UBALD1Q8TB05 177 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 OR2V2Q96R30 315 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 TNFSF12O43508 249 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 AESQ08117 197 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 SELENOHQ8IZQ5 122 aaKnown RBP22.31■■□□□ 1.16
COL13A1-210ENST00000517713 MEGF10Q96KG7 1140 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 DMRTA2Q96SC8 542 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 SHARPINQ9H0F6 387 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 CYTL1Q9NRR1 136 aa22.31■■□□□ 1.16
COL13A1-210ENST00000517713 SPRY3O43610 288 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 CDS2O95674 445 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 HEXAP06865 529 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 HKR1P10072 659 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 UCP1P25874 307 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 OR3A1P47881 315 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 SELENOVP59797 346 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 OR52M1Q8NGK5 317 aa22.3■■□□□ 1.16
COL13A1-210ENST00000517713 MRPL37Q9BZE1 423 aaKnown RBP22.3■■□□□ 1.16
COL13A1-210ENST00000517713 METRNQ9UJH8 293 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms