RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ISL1P61371 349 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 ZNF85Q03923 595 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 FAHD1Q6P587 224 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 OR6Q1Q8NGQ2 317 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 ST6GALNAC6Q969X2 333 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 MBOAT4Q96T53 435 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 ZNF581Q9P0T4 197 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 WARS2Q9UGM6 360 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 IGHV3-43A0A0B4J1X8 118 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 MT-ND2P03891 347 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 IGHV3-43DP0DP04 118 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 MTNR1BP49286 362 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 RAB9AP51151 201 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 NANOS3P60323 173 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 ZSCAN26Q16670 478 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 C12orf73Q69YU5 71 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 FAM220AQ7Z4H9 259 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 Q8N1Y9 231 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 OR8H1Q8NGG4 311 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 OR13C3Q8NGS6 347 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 FAM118AQ9NWS6 357 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 ARL2BPQ9Y2Y0 163 aa15.69■□□□□ 0.1
SQSTM1-215ENST00000514093 SDCBPO00560 298 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 SLC31A2O15432 143 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 FAM107AO95990 144 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 IGLV1-40P01703 118 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 ATP6V1E1P36543 226 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 ACSM6Q6P461 480 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 LINC00311Q8N616 119 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 DNAJC9Q8WXX5 260 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 NSL1Q96IY1 281 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 OR51J1Q9H342 316 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 GHITMQ9H3K2 345 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 C19orf73Q9NVV2 129 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 ZNF580Q9UK33 172 aa15.68■□□□□ 0.1
SQSTM1-215ENST00000514093 AQP12BA6NM10 295 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 ZAR1LA6NP61 321 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 ATP6V0E1O15342 81 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 FKBP6O75344 327 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 DCTN3O75935 186 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 ISG15P05161 165 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 DBTP11182 482 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 IL3RAP26951 378 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 KISS1Q15726 138 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 PIGYQ3MUY2 71 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 AQP12AQ8IXF9 295 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 OR10K1Q8NGX5 313 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 CASTOR1Q8WTX7 329 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 ARL11Q969Q4 196 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 ZCCHC4Q9H5U6 513 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 PARP11Q9NR21 331 aa15.67■□□□□ 0.1
SQSTM1-215ENST00000514093 IGHV4OR15-8A0A075B7B6 117 aa15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 A0A087WW49 117 aa15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 LINC01619G3V211 115 aa15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 LPCAT4Q643R3 524 aa15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 CCDC107Q8WV48 283 aa15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 DPCDQ9BVM2 203 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 GFOD1Q9NXC2 390 aa15.66■□□□□ 0.1
SQSTM1-215ENST00000514093 TRAV41A0A0B4J266 112 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 C15orf65H3BRN8 121 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 GZMHP20718 246 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 VHLP40337 213 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 MMDQ15546 238 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 ZNF691Q5VV52 312 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 ELP2Q6IA86 826 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 SPATA24Q86W54 205 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 SUMF2Q8NBJ7 301 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 NRBF2Q96F24 287 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 RITA1Q96K30 269 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 OR4C12Q96R67 309 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 SPATA25Q9BR10 227 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 CHCHD6Q9BRQ6 235 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 TOLLIPQ9H0E2 274 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 ALMS1Q8TCU4 4167 aa15.65■□□□□ 0.1
SQSTM1-215ENST00000514093 FAM90A10PA6NDY2 464 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 OR8U9P0C7N5 309 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 PAX5Q02548 391 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 GALEQ14376 348 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 IL13RA2Q14627 380 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 SGPP2Q8IWX5 399 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 OR52M1Q8NGK5 317 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 THTPAQ9BU02 230 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 TPSG1Q9NRR2 321 aa15.64■□□□□ 0.09
SQSTM1-215ENST00000514093 A8MZ25 164 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 HTR1AP08908 422 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 CNTFRP26992 372 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 BLVRBP30043 206 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 KCNJ3P48549 501 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 ZNF134P52741 427 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 PITPNAQ00169 270 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 HAGHQ16775 308 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 SLC25A48Q6ZT89 311 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 C8orf31Q8N9H6 132 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 MED4Q9NPJ6 270 aa15.63■□□□□ 0.09
SQSTM1-215ENST00000514093 IGHV7-81A0A0B4J1V7 117 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 TMEM30CPA0ZSE6 113 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 SULT1B1O43704 296 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 HTR3BO95264 441 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 ARSBP15848 533 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 FDX2Q6P4F2 183 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms