RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
CHTOP-206ENST00000495554 GPR137BO60478 399 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 FBXO24O75426 580 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 MED6O75586 246 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 TUSC2O75896 110 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SLC34A2O95436 690 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 CDS2O95674 445 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 P2RY1P47900 373 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 HERPUD1Q15011 391 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SWI5Q1ZZU3 235 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 TBC1D28Q2M2D7 210 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 OR2T2Q6IF00 324 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 OR51B6Q9H340 312 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 DNASE2O00115 360 aaPredicted RBP12.61□□□□□ -0.39
CHTOP-206ENST00000495554 GPR31O00270 319 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 CAV2P51636 162 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 IGF2-ASQ6U949 168 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 FAM58AQ8N1B3 248 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 OR4D5Q8NGN0 318 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 ERGIC1Q969X5 290 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 TMEM56Q96MV1 263 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SSX3Q99909 188 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 UBE2J1Q9Y385 318 aaPredicted RBP12.61□□□□□ -0.39
CHTOP-206ENST00000495554 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
CHTOP-206ENST00000495554 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
CHTOP-206ENST00000495554 TRBV6-6A0A0A6YYG2 114 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 IGHG3P01860 377 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 ADCYAP1P18509 176 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 CA6P23280 308 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 LPAR6P43657 344 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
CHTOP-206ENST00000495554 C10orf91Q5T1B1 145 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 ZNF818PQ6ZRF7 136 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 PRSS33Q8NF86 280 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 PARD6GQ9BYG4 376 aaPredicted RBP12.6□□□□□ -0.39
CHTOP-206ENST00000495554 OR51I2Q9H344 312 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 RHOFQ9HBH0 211 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 NIT2Q9NQR4 276 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 BORCS7-ASMTA0A0B4J1R7 106 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 A8MXE2 369 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 TGFBR3Q03167 851 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 MRPL49Q13405 166 aaKnown RBP12.6□□□□□ -0.39
CHTOP-206ENST00000495554 GNMTQ14749 295 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 ETV3LQ6ZN32 361 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 ZNF695Q8IW36 515 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 GAPTQ8N292 157 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 MRPL30Q8TCC3 161 aaKnown RBP12.6□□□□□ -0.39
CHTOP-206ENST00000495554 FAM122AQ96E09 287 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 ZNF488Q96MN9 340 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 TREM1Q9NP99 234 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 UQCC1Q9NVA1 299 aa12.6□□□□□ -0.39
CHTOP-206ENST00000495554 CARHSP1Q9Y2V2 147 aaKnown RBP12.6□□□□□ -0.39
CHTOP-206ENST00000495554 IGKV1-6A0A0C4DH72 117 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 PRR33A8MZF0 331 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 J3QT63 122 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 IFNA4P05014 189 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 C5orf24Q7Z6I8 188 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 OR10J5Q8NHC4 309 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 TRAV24A0A0B4J272 114 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 TMEM210A6NLX4 147 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 HS3ST1O14792 307 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 GOSR1O95249 250 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 ZNF14P17017 642 aaPredicted RBP12.59□□□□□ -0.39
CHTOP-206ENST00000495554 F2RL1P55085 397 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 SPATA46Q5T0L3 261 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 SLC16A13Q7RTY0 426 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 CMTM1Q8IZ96 169 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 SPAG16Q8N0X2 631 aa12.59□□□□□ -0.39
CHTOP-206ENST00000495554 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
CHTOP-206ENST00000495554 ZFHX2Q9C0A1 2572 aaPredicted RBP12.58□□□□□ -0.4
CHTOP-206ENST00000495554 IGKV1D-13A0A0B4J2D9 117 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 NKX2-6A6NCS4 301 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 TCAPO15273 167 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 SEC11BP0C7V7 166 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 IGKV1-13P0DP09 117 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 NOVA1P51513 510 aaKnown RBP12.58□□□□□ -0.4
CHTOP-206ENST00000495554 DEFA6Q01524 100 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 WDR73Q6P4I2 378 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 BTNL8Q6UX41 500 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 PUSL1Q8N0Z8 303 aaKnown RBP12.58□□□□□ -0.4
CHTOP-206ENST00000495554 DMBX1Q8NFW5 382 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 RDH5Q92781 318 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 RTL8AQ9BWD3 113 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 SEC11CQ9BY50 192 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 PLA2G2EQ9NZK7 142 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 ZDHHC8Q9ULC8 765 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms