RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CCNB2O95067 398 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 SLC2A5P22732 501 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 MTCP1P56278 107 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 PDZK1IP1Q13113 114 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 CDK5R1Q15078 307 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 TMEM179BQ7Z7N9 219 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 RDH10Q8IZV5 341 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 LINC00311Q8N616 119 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 UBALD1Q8TB05 177 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 TEX47Q8TBZ9 253 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 HOPXQ9BPY8 73 aaPredicted RBP10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 RANGRFQ9HD47 186 aaPredicted RBP10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 SLC2A8Q9NY64 477 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 PKD1P98161 4303 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 IGHV3-43A0A0B4J1X8 118 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 IGKV1-9A0A0C4DH69 117 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 ZNF785A8K8V0 405 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 SLC31A2O15432 143 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 EDF1O60869 148 aaKnown RBP10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 KRT36O76013 467 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 KDM4BO94953 1096 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 IGHV3-43DP0DP04 118 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 IL3RAP26951 378 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 CRIP2P52943 208 aaPredicted RBP10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 ACTBP60709 375 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 SLC35D3Q5M8T2 416 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 RSBN1Q5VWQ0 802 aaPredicted RBP10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 LIN54Q6MZP7 749 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 PLPPR1Q8TBJ4 325 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 SIKE1Q9BRV8 207 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 SLC23A1Q9UHI7 598 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 ERGIC3Q9Y282 383 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 SNX5Q9Y5X3 404 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 HSPG2P98160 4391 aa10.28□□□□□ -0.76
EXOSC3-207ENST00000490516 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 H0YJX3 145 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 SDCBPO00560 298 aaPredicted RBP10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 SYT7O43581 403 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 NDUFB8O95169 186 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 SERPINA3P01011 423 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 EGR2P11161 476 aaPredicted RBP10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 MAGEA2P43356 314 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 LSAMPQ13449 338 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 DYRK1AQ13627 763 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 APOFQ13790 326 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 C5orf64Q2M2E5 130 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 PAN3Q58A45 887 aaKnown RBP10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 FAHD1Q6P587 224 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 DNAAF1Q8NEP3 725 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 ASB17Q8WXJ9 295 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 CST11Q9H112 138 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 NCOR1P1Q9H4R4 102 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 MRGBPQ9NV56 204 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 CNOT2Q9NZN8 540 aaKnown RBP10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 ABCD2Q9UBJ2 740 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 NUBP2Q9Y5Y2 271 aa10.27□□□□□ -0.77
EXOSC3-207ENST00000490516 DNAH17Q9UFH2 4485 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 TRAV24A0A0B4J272 114 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 H3BN98 237 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 NBR2O15453 112 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 TXNL1O43396 289 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 XRCC3O43542 346 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 GMNNO75496 209 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 PYHIN1Q6K0P9 492 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF322Q6U7Q0 402 aaPredicted RBP10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF575Q86XF7 245 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 LAX1Q8IWV1 398 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 TCTEX1D1Q8N7M0 179 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 C8orf31Q8N9H6 132 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 ABHD5Q8WTS1 349 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 NIPSNAP1Q9BPW8 284 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF251Q9BRH9 671 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 DGCR6LQ9BY27 220 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 BARHL1Q9BZE3 327 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
EXOSC3-207ENST00000490516 MSGN1A6NI15 193 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 RPP14O95059 124 aaKnown RBP10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 TRGV3P03979 118 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 CXCR4P61073 352 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 CX3CL1P78423 397 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 ACTBL2Q562R1 376 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 UNQ5815/PRO19632Q6UWF5 114 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 HDXQ7Z353 690 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 WFDC3Q8IUB2 231 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 OR2K2Q8NGT1 345 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 UTP4Q969X6 686 aaKnown RBP10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 FAM103A1Q9BTL3 118 aaKnown RBP10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 FAM118AQ9NWS6 357 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 GFOD1Q9NXC2 390 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 TMEM14AQ9Y6G1 99 aa10.25□□□□□ -0.77
EXOSC3-207ENST00000490516 CCDC182A6NF36 153 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 NDUFAB1O14561 156 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 COX4I1P13073 169 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 ATF4P18848 351 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms