RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CDRT1O95170 752 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 VSIG8P0DPA2 414 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 GTF2A1P52655 376 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 DGCR2P98153 550 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 TEX38Q6PEX7 206 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 TGIF2LXQ8IUE1 241 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 GPR148Q8TDV2 347 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 RGP1Q92546 391 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 METTL9Q9H1A3 318 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 IFT22Q9H7X7 185 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 ING4Q9UNL4 249 aa11.92□□□□□ -0.5
CSNK1E-208ENST00000431611 H0YHG0 523 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 H3BNX3 289 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 CCL24O00175 119 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 CSTBP04080 98 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 GPR12P47775 334 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 GP2P55259 537 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 RBM11P57052 281 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 RAB25P57735 213 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 PNLIPRP3Q17RR3 467 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 NHLRC3Q5JS37 347 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 IZUMO1Q8IYV9 350 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 OR52M1Q8NGK5 317 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 OR52N1Q8NH53 320 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 RAX2Q96IS3 184 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 S100A13Q99584 98 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 GON7Q9BXV9 100 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 ABCG5Q9H222 651 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 LIN7CQ9NUP9 197 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 MRPS18AQ9NVS2 196 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 IL36GQ9NZH8 169 aa11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 RPL36Q9Y3U8 105 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-208ENST00000431611 C15orf65H3BRN8 121 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 GEMIN2O14893 280 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 RAMP3O60896 148 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 LIMS3P0CW19 117 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 LIMS4P0CW20 117 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 PPP3R1P63098 170 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 KLHL22Q53GT1 634 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 DDI2Q5TDH0 399 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 RPL22L1Q6P5R6 122 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 NBEAL2Q6ZNJ1 2754 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 LINC00596Q86U02 117 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 LINC00311Q8N616 119 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 Q8N6K4 173 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 Q8N9W7 124 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 UBALD1Q8TB05 177 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 CCDC107Q8WV48 283 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 TMEM106AQ96A25 262 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 DCLRE1BQ9H816 532 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 TMEM138Q9NPI0 162 aa11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 PAK1IP1Q9NWT1 392 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-208ENST00000431611 LOC100130705A0A1B0GUX0 176 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 ORC5O43913 435 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 SERPINA2P20848 420 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 IL3RAP26951 378 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 CD1BP29016 333 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 GPR50Q13585 617 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 MPV17LQ2QL34 196 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 CCDC58Q4VC31 144 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 CXorf66Q5JRM2 361 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 OR8U1Q8NH10 309 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 NEK7Q8TDX7 302 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 RTN4IP1Q8WWV3 396 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
CSNK1E-208ENST00000431611 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 ZNF780AO75290 641 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 MOSP00540 346 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 MT-ND4P03905 459 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 ELANEP08246 267 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 NHLRC4P0CG21 123 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 BDKRB2P30411 391 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 CDX1P47902 265 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 FOXE3Q13461 319 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 KIR2DS1Q14954 304 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 DEFB136Q30KP8 78 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 FAM53AQ6NSI3 398 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 STX19Q8N4C7 294 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 TMEM104Q8NE00 496 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 OR8H1Q8NGG4 311 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 OR5M8Q8NGP6 311 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 APH1BQ8WW43 257 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 ST6GALNAC6Q969X2 333 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 S1PR3Q99500 378 aa11.88□□□□□ -0.51
CSNK1E-208ENST00000431611 SLC29A1Q99808 456 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms