RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 FUT3P21217 361 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 GLIPR1P48060 266 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 RAB11AP62491 216 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 HIST1H3AP68431 136 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 H3F3AP84243 136 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 SP5Q6BEB4 398 aaPredicted RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 ZNF818PQ6ZRF7 136 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 ZNF100Q8IYN0 542 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 SELENOHQ8IZQ5 122 aaKnown RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 TMEM54Q969K7 222 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 SNX22Q96L94 193 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 GFOD1Q9NXC2 390 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 IGKV1D-13A0A0B4J2D9 117 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 ZFP92A6NM28 416 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 CHST1O43916 411 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 HLA-HP01893 362 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 PGA5P0DJD9 388 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 IGKV1-13P0DP09 117 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 FGF8P55075 233 aaPredicted RBP12.3□□□□□ -0.44
MSH5-206ENST00000423982 VAMP2P63027 116 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 ZNF880Q6PDB4 577 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 CMTM1Q8IZ96 169 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 ZIC4Q8N9L1 334 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 SPACA9Q96E40 222 aaPredicted RBP12.3□□□□□ -0.44
MSH5-206ENST00000423982 VSIRQ9H7M9 311 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 CACNA1GO43497 2377 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 IGLV3-32A0A0A0MS00 114 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 ZFAND5O76080 213 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 NRASP01111 189 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 FOXC1Q12948 553 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 ZNF506Q5JVG8 444 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 AKR1C8PQ5T2L2 129 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 RAET1LQ5VY80 246 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 FAM180AQ6UWF9 173 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 GAPTQ8N292 157 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 CCDC71LQ8N9Z2 235 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 PIGCQ92535 297 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 CPNE4Q96A23 557 aaPredicted RBP12.3□□□□□ -0.44
MSH5-206ENST00000423982 SIGLEC12Q96PQ1 595 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 MED13Q9UHV7 2174 aa12.3□□□□□ -0.44
MSH5-206ENST00000423982 A0A087WWC5 75 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 SCTP09683 121 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 B4GALT1P15291 398 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 CRYGSP22914 178 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 Q6ZSR3 168 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 MYPOPQ86VE0 399 aaPredicted RBP12.29□□□□□ -0.44
MSH5-206ENST00000423982 OR5L2Q8NGL0 311 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 ZNF665Q9H7R5 613 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 BCO1Q9HAY6 547 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 IL36RNQ9UBH0 155 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 CHCHD2Q9Y6H1 151 aaPredicted RBP12.29□□□□□ -0.44
MSH5-206ENST00000423982 TNFSF11O14788 317 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 SELLP14151 372 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 MMP9P14780 707 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 NDUFB7P17568 137 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 ZNF92Q03936 586 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 TMEM267Q0VDI3 215 aaPredicted RBP12.29□□□□□ -0.44
MSH5-206ENST00000423982 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 PLPPR1Q8TBJ4 325 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
MSH5-206ENST00000423982 RSG1Q9BU20 258 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 SMDT1Q9H4I9 107 aa12.29□□□□□ -0.44
MSH5-206ENST00000423982 UNKLQ9H9P5 680 aaKnown RBP12.29□□□□□ -0.44
MSH5-206ENST00000423982 A0A0G2JRQ6 117 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 HSPA12AO43301 675 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 PDCD6O75340 191 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 CDS2O95674 445 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
MSH5-206ENST00000423982 CD200P41217 278 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 Q0VFX4 171 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 MALLQ13021 153 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 HNF4GQ14541 408 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 FAM90A2PQ658T7 463 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 LCN15Q6UWW0 184 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 SSX9Q7RTT3 188 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 FADS6Q8N9I5 356 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 PTPRBP23467 1997 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 RPL36A-HNRNPH2H7BZ11 118 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 SYNGR3O43761 229 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 CD55P08174 381 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 ZNF32P17041 273 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 PAX9P55771 341 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 UCP3P55916 312 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 CNN3Q15417 329 aaKnown RBP12.28□□□□□ -0.44
MSH5-206ENST00000423982 PLCXD3Q63HM9 321 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 SLC25A26Q70HW3 274 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 IMMP1LQ96LU5 166 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 SRXN1Q9BYN0 137 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms