RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 A0A1W2PP11 408 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 CA2P00918 260 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 C21orf58P58505 322 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 TNFAIP6P98066 277 aaPredicted RBP10.55□□□□□ -0.72
UBR4-205ENST00000417040 TMEM52Q8NDY8 209 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 OR52L2PQ8NGH6 319 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
UBR4-205ENST00000417040 SHISA7A6NL88 538 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 DEDDO75618 318 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 SOD3P08294 240 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 HKR1P10072 659 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 AESQ08117 197 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 COL5A1-AS1Q5SY13 56 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 TMEM92Q6UXU6 159 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 FAM216AQ8WUB2 273 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 ASCL3Q9NQ33 180 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 ZFP36L2P47974 494 aaKnown RBP10.54□□□□□ -0.72
UBR4-205ENST00000417040 TUSC5Q8IXB3 177 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 SLC26A1Q9H2B4 701 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 A6NDN8 102 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 LIPT2A6NK58 231 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 IGKV1D-16P01601 117 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 C10orf113Q5VZT2 155 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 ZNF788Q6ZQV5 615 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 SGMS2Q8NHU3 365 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 SCN1AP35498 2009 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 CD1BP29016 333 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 ABLIM2Q6H8Q1 611 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 PCED1AQ9H1Q7 454 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 CXXC4Q9H2H0 198 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 C7orf66A4D0T2 115 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 OOEPA6NGQ2 149 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 LILRA5A6NI73 299 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 LMO7DNF2Z398 122 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 SMPD2O60906 423 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 BGLAPP02818 100 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 OR6X1Q8NH79 312 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 MYOZ1Q9NP98 299 aaPredicted RBP10.54□□□□□ -0.72
UBR4-205ENST00000417040 ZFP64Q9NPA5 681 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 LRP5O75197 1615 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 NDUFB4O95168 129 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 CXorf1O96002 111 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 SMAD4Q13485 552 aaKnown RBP10.54□□□□□ -0.72
UBR4-205ENST00000417040 EIF4E3Q8N5X7 224 aaKnown RBP10.54□□□□□ -0.72
UBR4-205ENST00000417040 OR1P1Q8NH06 330 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 HSPB8Q9UJY1 196 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 SDK1Q7Z5N4 2213 aa10.54□□□□□ -0.72
UBR4-205ENST00000417040 MS4A18H0YCH9 400 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 SNCGO76070 127 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 CTGFP29279 349 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 MS4A18Q3C1V0 323 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 HIKESHIQ53FT3 197 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 RALYQ9UKM9 306 aaKnown RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 GON4LQ3T8J9 2241 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 A0A1W2PPV9 198 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 PPIHO43447 177 aaKnown RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 RECKO95980 971 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 ACP1P24666 158 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 REG1BP48304 166 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 MRPS11P82912 194 aaKnown RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 SLC25A30Q5SVS4 291 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 KMT5CQ86Y97 462 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 COA4Q9NYJ1 87 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 H2BFSP57053 126 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 ZNF600Q6ZNG1 722 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 APCDD1LQ8NCL9 501 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 TP53RKQ96S44 253 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 TINAGQ9UJW2 476 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 A0A1W2PN81 502 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 CORTO00230 105 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 SEC11BP0C7V7 166 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 GCSHP23434 173 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 DRD3P35462 400 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 GPR3P46089 330 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 OR8I2Q8N0Y5 310 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 PARD6GQ9BYG4 376 aaPredicted RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 CYB5R3P00387 301 aaPredicted RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 DDTP30046 118 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 PEBP1P30086 187 aaKnown RBP10.53□□□□□ -0.72
UBR4-205ENST00000417040 FXYD3Q14802 87 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 WDFY1Q8IWB7 410 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 COX14Q96I36 57 aa10.53□□□□□ -0.72
UBR4-205ENST00000417040 ADAMTSL1Q8N6G6 1762 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 FHITP49789 147 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 FOXO1Q12778 655 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 ANKRD55Q3KP44 614 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 C9orf50Q5SZB4 431 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 TPRX1Q8N7U7 411 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 LILRB1Q8NHL6 650 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms