RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CA7P43166 264 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 COL10A1Q03692 680 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 EXOSC2Q13868 293 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 SSX8Q7RTT4 187 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 MOGAT3Q86VF5 341 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 H1FOOQ8IZA3 346 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 ST6GALNAC3Q8NDV1 305 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 OR10Z1Q8NGY1 313 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 ITLN1Q8WWA0 313 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 MBD2Q9UBB5 411 aa16.69■□□□□ 0.26
PDLIM5-205ENST00000380180 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 IFNL4K9M1U5 179 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 AESQ08117 197 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 UNQ6494/PRO21346Q6UXR6 183 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 LDLRAD3Q86YD5 345 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 GCSAMQ8N6F7 178 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 RNF126Q9BV68 326 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 CCL28Q9NRJ3 127 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 GSKIPQ9P0R6 139 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 OR1A1Q9P1Q5 309 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 OR2W1Q9Y3N9 320 aa16.68■□□□□ 0.26
PDLIM5-205ENST00000380180 TMEM30CPA0ZSE6 113 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 GPR31O00270 319 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 PHF1O43189 567 aaPredicted RBP16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 IL15RAQ13261 267 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 GGNBP1Q5YKI7 109 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 SLC35E4Q6ICL7 350 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 LIAT1Q6ZQX7 453 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 FAM185AQ8N0U4 392 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 CD177Q8N6Q3 437 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 BOLLQ8N9W6 283 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 LILRB4Q8NHJ6 448 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 UBALD1Q8TB05 177 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 ZCCHC14Q8WYQ9 949 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 MSI2Q96DH6 328 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 TP53RKQ96S44 253 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 VRK1Q99986 396 aaPredicted RBP16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 TAF9BQ9HBM6 251 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 ERRFI1Q9UJM3 462 aaPredicted RBP16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 IFNA7P01567 189 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 OR3A1P47881 315 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 LRTM2Q8N967 370 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 KIF25Q9UIL4 384 aa16.67■□□□□ 0.26
PDLIM5-205ENST00000380180 NBASA2RRP1 2371 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 A0A0D9SG52 128 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 C3orf85A0A1B0GTC6 90 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 NPIPB11E5RHQ5 1161 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 H0YIZ8 118 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 HSD17B6O14756 317 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 RP2O75695 350 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 IFNA21P01568 189 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 IGHV1-46P01743 117 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 PSG2P11465 335 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 PRDX2P32119 198 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 HMGN3Q15651 99 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 TBC1D26Q86UD7 250 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 COQ2Q96H96 371 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 SHARPINQ9H0F6 387 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 COL6A6A6NMZ7 2263 aa16.66■□□□□ 0.26
PDLIM5-205ENST00000380180 RNF222A6NCQ9 220 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 CCL21O00585 134 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 LHBP01229 141 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 RND3P61587 244 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 IAH1Q2TAA2 248 aaPredicted RBP16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 ACOT7LQ6ZUV0 252 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 LYZL2Q7Z4W2 148 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 OR8H3Q8N146 312 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 GPHA2Q96T91 129 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 IL19Q9UHD0 177 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 DIDO1Q9BTC0 2240 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 KCNAB3O43448 404 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 OR2F2O95006 317 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 GATA4P43694 442 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 TNFAIP6P98066 277 aaPredicted RBP16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 OR2F1Q13607 317 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 RAB32Q13637 225 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 ZNF345Q14585 488 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 BEX5Q5H9J7 111 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 FAM219AQ8IW50 185 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 LGI3Q8N145 548 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 KCNRGQ8N5I3 272 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 LHFPL5Q8TAF8 219 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 C18orf12Q96KH6 178 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 KCNIP1Q9NZI2 227 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 DNAJB11Q9UBS4 358 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 UBQLN2Q9UHD9 624 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 ZDHHC8Q9ULC8 765 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 MAB21L2Q9Y586 359 aa16.65■□□□□ 0.26
PDLIM5-205ENST00000380180 ADGRG4Q8IZF6 3080 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 IGKV1D-17A0A075B6S4 117 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 IGHV3OR15-7A0A075B7D8 119 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 HSPA12AO43301 675 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 HEXAP06865 529 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 GABRA2P47869 451 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 ADIPOQQ15848 244 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 ADAM5Q6NVV9 412 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 FAM90A1Q86YD7 464 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 INO80EQ8NBZ0 244 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 FAM122AQ96E09 287 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 PRORYQ9H606 182 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms