RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SSBP3Q9BWW4 388 aaPredicted RBP22.37■■□□□ 1.17
SSBP4-202ENST00000348495 TBC1D24Q9ULP9 559 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 DOCK11Q5JSL3 2073 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 hADV38S2A0JD32 116 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 INPP1P49441 399 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 GNB2P62879 340 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 HLA-DRB3P79483 266 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 C11orf91Q3C1V1 193 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 ESCO2Q56NI9 601 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 C6orf183Q5T699 404 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 BTN2A1Q7KYR7 527 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 ZNF565Q8N9K5 539 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 DEDD2Q8WXF8 326 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 H1FXQ92522 213 aaKnown RBP22.36■■□□□ 1.17
SSBP4-202ENST00000348495 RAB39BQ96DA2 213 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 LPAR3Q9UBY5 353 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 LINC00312Q9Y6C7 94 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 KIAA2026Q5HYC2 2103 aa22.36■■□□□ 1.17
SSBP4-202ENST00000348495 A0A096LNT2 108 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 KIAA1324LA8MWY0 1029 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-202ENST00000348495 C12orf77C9JDV5 145 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 PHF1O43189 567 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-202ENST00000348495 GSTT2P0CG29 244 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 TBPP20226 339 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 GLP1RP43220 463 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 DYRK1AQ13627 763 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 TMEM200BQ69YZ2 307 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 TRAT1Q6PIZ9 186 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 OR5AP2Q8NGF4 316 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 C8orf46Q8TAG6 207 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 TAF9BQ9HBM6 251 aa22.35■■□□□ 1.17
SSBP4-202ENST00000348495 MEX3AA1L020 520 aaKnown RBP22.34■■□□□ 1.17
SSBP4-202ENST00000348495 A8MXK9 166 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 C15orf65H3BRN8 121 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 FABP7O15540 132 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 SCTP09683 121 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 GZMHP20718 246 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 STEAP1BQ6NZ63 245 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 OR4D10Q8NGI6 311 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 UBE2J1Q9Y385 318 aaPredicted RBP22.34■■□□□ 1.17
SSBP4-202ENST00000348495 TRGV10A0A0A0MS01 117 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 IL2RGP31785 369 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 HRH1P35367 487 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 TAS2R46P59540 309 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 ASAH1Q13510 395 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 ZNF273Q14593 569 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 CHRFAM7AQ494W8 412 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 FOXC2Q99958 501 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 KCNIP1Q9NZI2 227 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 OPN4Q9UHM6 478 aa22.34■■□□□ 1.17
SSBP4-202ENST00000348495 RPUSD1Q9UJJ7 312 aaKnown RBP22.34■■□□□ 1.17
SSBP4-202ENST00000348495 LINC00854A0A1B0GVQ3 168 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 C22orf46C9J442 243 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 AKAIN1P0CW23 69 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 SSTR5P35346 364 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 HERPUD1Q15011 391 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 ACTBL2Q562R1 376 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 VAX1Q5SQQ9 334 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 OR4A4PQ8NGN8 299 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 LINC00574Q9H8X3 128 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 HRASLSQ9HDD0 168 aa22.33■■□□□ 1.17
SSBP4-202ENST00000348495 IGKV1-6A0A0C4DH72 117 aa22.32■■□□□ 1.16
SSBP4-202ENST00000348495 USF1P22415 310 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-202ENST00000348495 ZFP36P26651 326 aaKnown RBP22.32■■□□□ 1.16
SSBP4-202ENST00000348495 C17orf58Q2M2W7 97 aa22.32■■□□□ 1.16
SSBP4-202ENST00000348495 LY6G5BQ8NDX9 201 aa22.32■■□□□ 1.16
SSBP4-202ENST00000348495 OR4C16Q8NGL9 310 aa22.32■■□□□ 1.16
SSBP4-202ENST00000348495 COX4I2Q96KJ9 171 aa22.32■■□□□ 1.16
SSBP4-202ENST00000348495 TINAGL1Q9GZM7 467 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-202ENST00000348495 M0QYG6 137 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 RAB3DO95716 219 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 PMP2P02689 132 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 RFX2P48378 723 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 ARPC4P59998 168 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 IGSF11Q5DX21 431 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 OVCH2Q7RTZ1 564 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 OR5H2Q8NGV7 314 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 CABLES2Q9BTV7 478 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 TAS2R3Q9NYW6 316 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 KBTBD11-OT1A0A1B0GTJ5 212 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 HBZP02008 142 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 CDK10Q15131 360 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 RNASE10Q5GAN6 216 aaKnown RBP22.31■■□□□ 1.16
SSBP4-202ENST00000348495 CD276Q5ZPR3 534 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 FAAP20Q6NZ36 180 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 FAM185AQ8N0U4 392 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 OR1L1Q8NH94 360 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 ARL11Q969Q4 196 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 KIRREL1Q96J84 757 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 C7orf50Q9BRJ6 194 aaKnown RBP22.31■■□□□ 1.16
SSBP4-202ENST00000348495 C11orf54Q9H0W9 315 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-202ENST00000348495 CALYQ9NYX4 217 aa22.31■■□□□ 1.16
SSBP4-202ENST00000348495 PRRC2AP48634 2157 aaKnown RBP22.3■■□□□ 1.16
SSBP4-202ENST00000348495 LOC105371242A0A075B767 164 aa22.3■■□□□ 1.16
SSBP4-202ENST00000348495 ZNF729A6NN14 1252 aaPredicted RBP22.3■■□□□ 1.16
SSBP4-202ENST00000348495 NPIPB11E5RHQ5 1161 aa22.3■■□□□ 1.16
SSBP4-202ENST00000348495 DIRAS3O95661 229 aa22.3■■□□□ 1.16
SSBP4-202ENST00000348495 DLX6P56179 175 aa22.3■■□□□ 1.16
SSBP4-202ENST00000348495 MEF2DQ14814 521 aa22.3■■□□□ 1.16
SSBP4-202ENST00000348495 UBALD1Q8TB05 177 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms