RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 OR8B8Q15620 311 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 SPATA46Q5T0L3 261 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 AKR1C8PQ5T2L2 129 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 PPP1R32Q7Z5V6 425 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 OR1K1Q8NGR3 316 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 OR2V1Q8NHB1 315 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 PLPPR1Q8TBJ4 325 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 TUBA4BQ9H853 241 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 Q9N2K0 584 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 WSB1Q9Y6I7 421 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 PPIHO43447 177 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 Q6ZRM9 215 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 TCFL5Q9UL49 500 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 CHD3Q12873 2000 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 LY86O95711 162 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 MMP7P09237 267 aaPredicted RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 UCP3P55916 312 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 GGACTQ9BVM4 153 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 TAAR3PQ9P1P4 343 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 HMGB3O15347 200 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 CYB5BO43169 146 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 LAMTOR5O43504 91 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 SCAF4O95104 1147 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 CDS2O95674 445 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 IFNA17P01571 189 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 PSG2P11465 335 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 PAX9P55771 341 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 RPS16P62249 146 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 RAB11AP62491 216 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 HOXA4Q00056 320 aaPredicted RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 M1APQ8TC57 530 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 SF3B5Q9BWJ5 86 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 DOK5Q9P104 306 aa16.98■□□□□ 0.31
CRLF3-201ENST00000324238 ERRFI1Q9UJM3 462 aaPredicted RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 NOSIPQ9Y314 301 aaKnown RBP16.98■□□□□ 0.31
CRLF3-201ENST00000324238 MED12LQ86YW9 2145 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 KIAA1549Q9HCM3 1950 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 CACNA1GO43497 2377 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 GJE1A6NN92 205 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 PITX3O75364 302 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 CNOT4O95628 575 aaKnown RBP16.97■□□□□ 0.31
CRLF3-201ENST00000324238 SRD5A2P31213 254 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 TUSC5Q8IXB3 177 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 HSPA12AO43301 675 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 MRPL33O75394 65 aaKnown RBP16.97■□□□□ 0.31
CRLF3-201ENST00000324238 TRGC2P03986 189 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 THOC3Q96J01 351 aaKnown RBP16.97■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF665Q9H7R5 613 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 OR1A1Q9P1Q5 309 aa16.97■□□□□ 0.31
CRLF3-201ENST00000324238 SPENQ96T58 3664 aaKnown RBP16.97■□□□□ 0.31
CRLF3-201ENST00000324238 HIKESHIQ53FT3 197 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 NMSQ5H8A3 153 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 MRPL21Q7Z2W9 205 aaKnown RBP16.96■□□□□ 0.31
CRLF3-201ENST00000324238 TMEM56Q96MV1 263 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 PPP1R3CQ9UQK1 317 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 TMEM56-RWDD3S4R434 201 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.31
CRLF3-201ENST00000324238 METTL15P1P0C7V9 234 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 HOXB1P14653 301 aaPredicted RBP16.96■□□□□ 0.31
CRLF3-201ENST00000324238 ELOBQ15370 118 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 PYY3Q5JQD4 70 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 CT55Q8WUE5 264 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 GPR146Q96CH1 333 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 LRFN1Q9P244 771 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 GVINP1Q7Z2Y8 2422 aa16.96■□□□□ 0.31
CRLF3-201ENST00000324238 USF3Q68DE3 2245 aa16.96■□□□□ 0.3
CRLF3-201ENST00000324238 CYB561P49447 251 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 ZFP36L1Q07352 338 aaKnown RBP16.95■□□□□ 0.3
CRLF3-201ENST00000324238 CLEC12BQ2HXU8 276 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 SSX7Q7RTT5 188 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 WDR5BQ86VZ2 330 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 YPEL4Q96NS1 127 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 TOLLIPQ9H0E2 274 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 OR51M1Q9H341 326 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 CEP250Q9BV73 2442 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 NDUFS6O75380 124 aaKnown RBP16.95■□□□□ 0.3
CRLF3-201ENST00000324238 RHBDL1O75783 438 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 SELEP16581 610 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 FAM53AQ6NSI3 398 aaPredicted RBP16.95■□□□□ 0.3
CRLF3-201ENST00000324238 LFNGQ8NES3 379 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 SLC25A31Q9H0C2 315 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 ZXDAP98168 799 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 ID3Q02535 119 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 SSX3Q99909 188 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 GPR61Q9BZJ8 451 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 TMPRSS5Q9H3S3 457 aa16.95■□□□□ 0.3
CRLF3-201ENST00000324238 COLQQ9Y215 455 aaPredicted RBP16.95■□□□□ 0.3
CRLF3-201ENST00000324238 TRAPPC2LH3BP13 241 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 NTN3O00634 580 aaPredicted RBP16.94■□□□□ 0.3
CRLF3-201ENST00000324238 VDAC1P21796 283 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 ARL16Q0P5N6 197 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 ZNF295-AS1Q8N0V1 137 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 ADGRG7Q96K78 797 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 FAM86C1Q9NVL1 165 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 IL36GQ9NZH8 169 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 LOXL2Q9Y4K0 774 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 NAPSAO96009 420 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 DCAF12Q5T6F0 453 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 OR10D4PQ8NGN7 298 aa16.94■□□□□ 0.3
CRLF3-201ENST00000324238 CLDND2Q8NHS1 167 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms